KEGG   Hymenobacter oligotrophus: D3Y59_00430
Entry
D3Y59_00430       CDS       T05656                                 
Name
(GenBank) hypothetical protein
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
hyh  Hymenobacter oligotrophus
Pathway
hyh03030  DNA replication
hyh03430  Mismatch repair
hyh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hyh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    D3Y59_00430
   03430 Mismatch repair
    D3Y59_00430
   03440 Homologous recombination
    D3Y59_00430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hyh03032]
    D3Y59_00430
   03400 DNA repair and recombination proteins [BR:hyh03400]
    D3Y59_00430
Enzymes [BR:hyh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     D3Y59_00430
DNA replication proteins [BR:hyh03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     D3Y59_00430
DNA repair and recombination proteins [BR:hyh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     D3Y59_00430
SSDB
Motif
Pfam: RNase_T Rv2179c-like DNA_pol_B_exo2 DUF748
Other DBs
NCBI-ProteinID: AYA35649
UniProt: A0A3B7R2S5
Position
complement(112631..113305)
AA seq 224 aa
MPLFGQGPAHYPPSVYRAAMQQRILQDLQEFNFTAIDFETAYEKRDSACSIGIVQVRGGN
VVAREQHLIRPPELRVSGINYSIHRISAEQLRPAATLLQLWSSIEHYVQGQLVVAHNASF
DVSVLQHSLATHQLPMPEFFSMCSIKLCKDAFPHIGRSKLSELSAHFGIELNHHDSLSDA
LACAELTLRALRSNHPFDFCFRQRDITKKVGKQAPVRRASYWRY
NT seq 675 nt   +upstreamnt  +downstreamnt
atgccgcttttcgggcaaggcccggcgcattacccaccttctgtttaccgcgcagccatg
cagcaacgcattctccaagaccttcaggagttcaacttcacggctattgactttgagacg
gcgtacgagaagcgcgacagcgcctgctccattggcattgtgcaagtgcgcggcggcaac
gttgtagcgcgcgagcagcacctcattcgtccgcccgagctgcgcgtgtcgggcatcaac
tacagcatccaccgcatatcggccgagcaactgcgccccgccgctacgctgctgcaattg
tggtccagcatcgagcactacgtgcaggggcaattggtggtagcgcacaacgcttccttc
gatgtgagcgtgctgcagcacagcttagccacgcaccagctgcccatgcccgagtttttc
agcatgtgctcaatcaagctctgcaaggatgcctttccgcacatcgggcgcagcaagcta
agcgagctgtcggctcatttcggcatcgagctaaaccaccacgacagcctttccgacgcc
ttggcttgcgccgagctaacgctgcgcgccttgcgcagcaaccacccgttcgatttctgc
ttccgccagcgcgacattaccaagaaggtgggcaagcaagccccggtacgacgcgctagt
tattggcgctactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system