KEGG   Hymenobacter sp. APR13: N008_19775
Entry
N008_19775        CDS       T03213                                 
Name
(GenBank) hypothetical protein
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
hym  Hymenobacter sp. APR13
Brite
KEGG Orthology (KO) [BR:hym00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hym03032]
    N008_19775
   03400 DNA repair and recombination proteins [BR:hym03400]
    N008_19775
Enzymes [BR:hym01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     N008_19775
DNA replication proteins [BR:hym03032]
 Prokaryotic type
  DNA Topoisomerases
   N008_19775
DNA repair and recombination proteins [BR:hym03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      N008_19775
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3 TRSP GyrB_hook
Other DBs
NCBI-ProteinID: AII54214
UniProt: A0A076I273
Position
complement(4611157..4613043)
AA seq 628 aa
MYIGDTGAKGLHHLVWEVVDNSIDEALAGQCDRIEVSIHPGNSISVQDNGRGIPVGINQK
FGKSALEIALTVLHAGGKFDKNSYKTSGGLHGVGVSCVNALSTHTHVKVQREGRMYEQEY
TIGVPQYDVREIGPADGRGTYVWFQPDGTIFDETLEYSYERIATRLRELAYLNRGIRIIL
TDLREQAADAEGQPLRTEFYSEGGVAEYVQYLDSSRTVLMTKPVYVATERGIPVEVAFQY
NDSYQEHIFSYVNNINTHEGGTHVAGFRSAITRVLKAYAEKSGEVAKAKIEIQGDDFREG
LTAVISVKVAEPKFEGQTKGKLGNSEVSGAVNQVVGEILNQYLEENPKEARVIVEKVILA
AKARVAAKKAREMVQRKTVLGSNSLPGKLADCSESDPAICELYLVEGDSAGGTAKQGRNR
AFQAILPLRGKILNVEKAQEHRIYENEEIRNMITALGVSFEKKTDEDDGSTSRSLNLDKL
RYHKVIIMTDADIDGSHIRTLILTFFFRYMPELIEKGYIYIALPPLYLVKRGKEERYCWT
EEERMAAQEEMGRGKPETVNVQRYKGLGEMNAEQLWTTTMQPDTRSLKRVDVDSGVEADH
LFSMLMGDEVAPRRDFIEKNAKYAKLDV
NT seq 1887 nt   +upstreamnt  +downstreamnt
atgtacatcggcgacactggcgcgaaaggccttcaccacctggtgtgggaggtagtggat
aactccattgacgaagccctggccggccagtgcgaccgaatcgaggtgagcattcacccc
ggcaactccatttctgtacaagacaacggccgcgggattcccgtcggcatcaaccagaag
ttcggcaaatcagccctcgaaattgccctgaccgtgctgcacgccggcggcaagttcgac
aagaacagctacaagacctccggcggcctgcacggcgtgggcgtgtcctgcgtgaatgcc
ctcagcacccacacccacgtgaaggtgcagcgcgaaggccgcatgtacgagcaggaatac
accattggcgtgccccagtacgacgtgcgcgaaatcgggcctgctgacggccgcggcacc
tacgtgtggttccaacctgatggcaccatcttcgacgaaacgctggagtactcctacgag
cggattgccacccgcctgcgcgagctggcctacctcaaccgcggcatccgcatcatcctc
actgacctgcgcgagcaggccgccgatgccgaaggccagccgctgcgcaccgagttctac
tcggaaggcggtgtggccgagtacgtgcagtacctcgacagcagccgcacagtgctcatg
accaagcccgtgtacgtggctacggagcgcggcattccggtggaagtggcgttccagtac
aacgactcgtaccaggagcacatcttctcctacgtcaacaacatcaacacccacgagggc
ggcacgcacgtggcaggcttccgctcggccattacgcgggtgctgaaagcctacgccgag
aaatcgggcgaggtggccaaggccaaaattgaaattcagggcgacgacttccgcgaaggc
ctcaccgccgttatttcggtgaaggtggccgagcccaagtttgagggccagaccaaaggc
aagctgggcaactccgaagtgagcggcgccgtgaaccaggtagtaggcgaaatcctcaat
cagtatctggaggaaaaccccaaggaagcccgcgtcatcgtcgagaaggtgattctggct
gccaaagcccgcgtagccgccaagaaggcccgcgaaatggtgcagcgcaaaaccgtgctg
ggctccaactcgctgcccggcaagctcgccgactgctcggagtcagaccccgccatctgc
gagctgtacctggtggaaggtgactcggctggcggcaccgccaagcagggccgcaaccgc
gccttccaggccattctgccgctgcggggtaagatcctgaacgtagagaaggcccaggag
caccgcatctacgaaaacgaggaaatccggaacatgattacggccctcggcgtgagcttc
gaaaagaagaccgacgaagacgacggcagcaccagccgctcgctgaacctcgacaagctg
cgctaccacaaggtcatcatcatgaccgatgctgacatcgacggctcgcacatccggacc
ctgatcctgacgttcttcttccgctacatgccggagctgatcgagaaaggctacatctac
atcgcgctgccgccgctgtatctggtgaagcgcggcaaggaagagcgctactgctggacc
gaagaggagcgcatggctgcccaggaagaaatgggccgcggcaagcccgaaacggtgaac
gtgcagcgctacaaaggcctcggcgaaatgaacgccgagcagctctggaccaccaccatg
cagcccgacacccgctccctgaagcgtgtagacgtggactcgggcgtggaagccgaccac
ctcttctccatgctgatgggcgacgaagtggccccccgccgcgacttcatcgagaaaaac
gccaagtacgccaagctggacgtgtaa

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