KEGG T06379: F9K07

Hydrogenophaga sp. BPS33: F9K07_29155

Entry

F9K07_29155       CDS       T06379

Name

(GenBank) hypothetical protein

K01167

ribonuclease T1 [EC:4.6.1.24]

Organism

hyn Hydrogenophaga sp. BPS33

Brite

KEGG Orthology (KO) [BR:hyn00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hyn03019]
    F9K07_29155
   03016 Transfer RNA biogenesis [BR:hyn03016]
    F9K07_29155
Enzymes [BR:hyn01000]
4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.24  ribonuclease T1
     F9K07_29155
Messenger RNA biogenesis [BR:hyn03019]
Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     F9K07_29155
Transfer RNA biogenesis [BR:hyn03016]
Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    F9K07_29155
Prokaryotic type
    F9K07_29155

SSDB

Motif

Pfam:

Ribonuclease

Other DBs

NCBI-ProteinID:

QHE89093

UniProt:

A0A6P1J263

Position

6292860..6293249

AA seq 129 aa
MASKALAITLIAALGTILVQARTPDAAAAGSNAAVMVEVSGLPVQGQEVLGRIRQGGPFR
YDKDGSVFGNRERLLPGEKRGYYREYTVPTPGVRHRGARRIVCGGFKPRVPDTCYYTEDH
YSSFRLILQ

NT seq 390 nt +upstreamnt +downstreamnt
atggcctccaaggccttggcgatcacgttgatcgccgcacttggcaccatactggtgcaa
gcccgaacccctgatgccgcagccgccggatccaacgccgccgtgatggtggaagtttca
ggtttgccggtgcagggccaggaagtgctcggccggattcgacaaggcggtccgtttcgc
tacgacaaggacggctcggtgtttggcaatcgcgaacgcctgttgccaggtgaaaagcgc
gggtactaccgggaatacacggtgcccacccctggggttcggcatcggggagcccgacgg
atcgtgtgtggggggttcaagccccgggttcctgacacgtgttattacaccgaagaccac
tacagcagctttcggctgatcctgcagtga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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