KEGG   Hydrogenimonas sp. MAG: NNO_0425
Entry
NNO_0425          CDS       T05789                                 
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
hyo  Hydrogenimonas sp. MAG
Pathway
hyo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hyo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    NNO_0425
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hyo03400]
    NNO_0425
DNA repair and recombination proteins [BR:hyo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NNO_0425
SSDB
Motif
Pfam: UvrC_RNaseH_dom UVR HHH_5 GIY-YIG
Other DBs
NCBI-ProteinID: BBG65128
UniProt: A0A3G9HG44
Position
complement(381840..383648)
AA seq 602 aa
MLETLKNLPDRPGVYQYFDRDGRLLYVGKAKSLKKRVKSYFRMRPELAPAPRLGPRIHRM
VSKTARIETIVTQSESDALLLENSLIKQLKPKYNILLRDDKTYPYIYLDLSQPFPRFELT
RRVVKGKDVKYFGPFPAGARAILSSLYELVPLVQKKGCLKGKKACLFHQIGRCMAPCEGK
IDTKEYAKLIDEALGYIHNKKRLISALKEKMSFYAESMRYEEAAEIRDRIEAIGKIEEYS
AADLATLENLDIFTVGYDDTHGVIVRMFMREGKIVSSSHTLFDVHEDIDIQEIYRRAILE
FYAPGTPFAAGTVLTAVPLDEASGLSDLISIRVGRRVGILSPKRGAKRRLVELGLQNAEE
LLKQHKKRPKSLLSKQIGDLLGLSSPPVRVEVFDNSHLMGRACVGAMAVMHEERWDKESY
RHYNLDSRDEYGQMREMLGRRIESFEKEPPPDLWVIDGGETLRQLAVTLLKDAGVNLPVV
AIAKEKIDAKAHRAKGAAKDILHTPEGELRLMPGDGRLQWFQRLRDEAHRFAISFHKKQR
LKREKEISLLEAEGIGPAKVKRLLDFFGTFEAVKSAGIKDLSAVLSEKDAQSLFEHLKNI
AK
NT seq 1809 nt   +upstreamnt  +downstreamnt
atgctcgagacgctgaaaaaccttccggacaggccgggtgtataccaatatttcgaccgc
gacggcaggcttctttatgtgggaaaggcgaagagtctcaaaaagcgggtgaaaagctac
ttcagaatgaggccggaacttgcgccggcaccgaggctcgggccgcgcatacatagaatg
gtcagcaagacggcaagaatagagacaatcgttacacagagcgaaagcgacgcattgctg
ctggaaaactcgctgataaaacagctcaaacccaaatacaacatcctgctgcgcgacgac
aagacatacccctacatctacctggacctcagccaaccctttccccgcttcgaactcacc
agaagagtggtaaagggaaaagatgtaaagtatttcggcccgtttcccgccggagcgaga
gccattctctcctctctttacgagttggtgcctctcgttcagaaaaaggggtgcctgaag
gggaaaaaagcgtgtcttttccatcagataggccgctgcatggccccttgcgaagggaag
atcgacacgaaagagtatgcgaaactgatagatgaggcgctcggctatatccacaacaaa
aagaggctcatctccgccctgaaggagaagatgtctttttacgcggagtcgatgcgctac
gaagaggctgcggagatccgcgaccgcatagaggcgataggaaagatcgaggagtactcc
gcagcggaccttgcaacgctcgaaaacctcgatattttcacggtcggctacgacgatacc
cacggggtgatagtcagaatgttcatgcgggaagggaagatcgtatcttcaagccatacc
ctcttcgatgtgcatgaagatatcgacatacaggagatttatagacgtgcgattctggag
ttctacgccccgggaaccccgtttgcggcaggcacggtcctgactgccgtaccgctggac
gaggcttccggcctttccgaccttataagcataagagtgggccgaagagtcggaatactc
tcacccaaaaggggagcgaaaaggcggcttgtcgaactggggctgcagaatgccgaagag
cttttgaaacagcataaaaagagacctaagtcgctgctttcgaagcagataggcgatcta
ctggggctctcctcaccgccggtcagagtggaggtcttcgacaactcgcaccttatggga
agagcctgtgtgggagcgatggcggtaatgcacgaagagaggtgggacaaagagagttac
aggcactacaacctggactccagagacgaatacggccagatgagggagatgcttggcaga
cggatagagagcttcgaaaaagagccgccgcccgacctgtgggtaatagacgggggagag
acgctgcggcagctggctgtaactctcctgaaagatgcgggggtcaacctcccggtggtc
gccatagcgaaggagaagatcgacgccaaggcccaccgggcgaaaggggccgcgaaagat
atactccatacgcccgaaggtgagctgcggctcatgccaggcgacggaaggcttcagtgg
tttcagcggctgcgtgacgaagcgcaccgcttcgcgatatcgtttcacaaaaagcagcgc
ctgaagagagagaaggagatctccctgcttgaagcggaaggaataggccctgcgaaggtc
aaacggcttctcgactttttcggcaccttcgaagctgtgaaaagtgccggcataaaagat
ctctccgcggtgttgagcgaaaaggatgcgcaaagccttttcgagcacctgaaaaatatc
gctaaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (11)   

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