KEGG   Hymenobacter psoromatis: A0257_19015
Entry
A0257_19015       CDS       T04376                                 
Name
(GenBank) integration host factor subunit beta
  KO
K03530  DNA-binding protein HU-beta
Organism
hyp  Hymenobacter psoromatis
Brite
KEGG Orthology (KO) [BR:hyp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hyp03032]
    A0257_19015
   03036 Chromosome and associated proteins [BR:hyp03036]
    A0257_19015
   03400 DNA repair and recombination proteins [BR:hyp03400]
    A0257_19015
DNA replication proteins [BR:hyp03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    A0257_19015
Chromosome and associated proteins [BR:hyp03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    A0257_19015
DNA repair and recombination proteins [BR:hyp03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      A0257_19015
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_1 HU-CCDC81_euk_2 ORC2 HU-CCDC81_bac_2 KilA-N DUF2267 MOZ_SAS
Other DBs
NCBI-ProteinID: AMR29852
Position
complement(4480316..4480666)
AA seq 116 aa
MTKAEVISEISQKTGIEKADVLTTVEAFFKVVKDSMTEGHNIYVRGFGSFVNKKRARKVA
RNISKNTSLIIDEHFIPSFKPSKTFVAKIKASKKITGESSEKAPKKAAKGTKKAKA
NT seq 351 nt   +upstreamnt  +downstreamnt
gtgaccaaagctgaggtaatttccgaaatctcgcaaaaaaccggcattgagaaagccgat
gtgctgacgaccgtcgaagcattcttcaaagtagtgaaggattcgatgaccgaaggccac
aacatttacgtgcgcggcttcggctcgttcgtaaacaaaaagcgggctcgcaaagtagcc
cgtaacatctctaaaaacacgtcgctcatcatcgacgagcatttcatcccaagcttcaag
ccgagcaaaacttttgttgccaagattaaggccagcaagaaaattaccggtgagtcttcg
gagaaagcccctaagaaggctgccaaaggcaccaaaaaagccaaggcttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system