KEGG   Hydrogenophaga sp. RAC07: BSY239_2521
Entry
BSY239_2521       CDS       T04455                                 
Symbol
rpoE
Name
(GenBank) RNA polymerase sigma factor RpoE
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
hyr  Hydrogenophaga sp. RAC07
Brite
KEGG Orthology (KO) [BR:hyr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hyr03021]
    BSY239_2521 (rpoE)
Transcription machinery [BR:hyr03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BSY239_2521 (rpoE)
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23 HTH_20 Phage_antitermQ HTH_AsnC-type
Other DBs
NCBI-ProteinID: AOF84532
UniProt: A0A1B3LUJ9
Position
complement(2691423..2692064)
AA seq 213 aa
MTPEDHTAPPPPDSDVMLVQRTLGGEQRAFELLVIKYQRRVERLIGRMVRDSDLVQDIAQ
ETFIRAYRALAQFRGDAQFYTWLYRIAVNTAKKQLMELKRDPLVFQSQMKSSDDDETSSS
ERELNFNAADTETPEAVLASKEIAQAVNAAMDALPEELRMAITLREIEGMSYEEIAQALE
CPIGTVRSRIFRAREAISGRIKPMLERQTGKRW
NT seq 642 nt   +upstreamnt  +downstreamnt
atgactcctgaagaccacaccgcccccccgcctcccgacagcgacgtcatgttggtgcag
cgcacattgggcggcgagcagcgagcatttgaattgctcgtcatcaaataccagcgccgc
gtcgagcggctcatcgggcgcatggtgcgcgactccgatctggttcaagacatcgcgcag
gagactttcatccgggcctaccgggctctggcgcagttccgcggcgacgcccagttctac
acctggctgtaccgcatcgcggtgaacaccgcgaaaaagcagctgatggagctcaagcgc
gaccccctggttttccagtcgcagatgaaatcgtcggacgacgatgaaacttcctcgtcc
gaacgcgaactaaatttcaacgcggccgacaccgagacgcccgaggcggtgctggcgagc
aaggagattgcccaagcggtcaacgcggccatggacgcgctgcccgaagagttgcgaatg
gcaatcaccttgcgggaaatcgagggcatgagctacgaggaaatcgcgcaggcgttggaa
tgtccgattggaacggttcgttcgcggatttttcgagcccgcgaggccatttccggacgc
atcaagccgatgctggaacgccaaacgggcaaacgctggtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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