KEGG   Hydrogenophaga sp. RAC07: BSY239_2721
Entry
BSY239_2721       CDS       T04455                                 
Name
(GenBank) D-ala D-ala ligase family protein
  KO
K01968  3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
Organism
hyr  Hydrogenophaga sp. RAC07
Pathway
hyr00280  Valine, leucine and isoleucine degradation
hyr01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:hyr00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    BSY239_2721
Enzymes [BR:hyr01000]
 6. Ligases
  6.4  Forming carbon-carbon bonds
   6.4.1  Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
    6.4.1.4  methylcrotonoyl-CoA carboxylase
     BSY239_2721
SSDB
Motif
Pfam: CPSase_L_D2 Biotin_carb_N Biotin_carb_C Biotin_lipoyl Biotin_lipoyl_2 Dala_Dala_lig_C ATP-grasp HlyD_3 HlyD_D23 DUF3182 ATP-grasp_5 ATP-grasp_4 ATPgrasp_ST
Other DBs
NCBI-ProteinID: AOF84522
UniProt: A0A1B3LUJ0
Position
complement(2883698..2885722)
AA seq 674 aa
MFNTLLIANRGEIACRIARTARRMGLRTVAVYSDADREALHVALCDTAVRIGAPEAARSY
LDAAAIVAAARAAGAQAIHPGYGFLSESLALIDACEAVGLIFVGPSREAIRRMGSKIESK
RIALGAGVPVVPGYHADDQDSAVLQAAAGGIGYPVLIKASAGGGGKGMRVVRSAADFSAA
LDTVRREAKASFGDDRVLLERYLDEPRHLEVQLLGDKHGHLVHLFERECSIQRNHQKVIE
EAPAPHLPPAVREALFSHALTIGHAIGYDSTGTIEFIHDSRSGDTFFLEMNTRLQVEHPV
TELTVGIDLVEWQLRVATGEPLGFAQPDLTQRGCAIEARVCAENPAAGFAPEIGALIDYR
EPRGEGVRVDSGMRNGSHVTPYYDSMLAKVIAHADDRPTAARRLATALDDTVLLGVHSNL
GFLADLLRHDHFAQVLTTHYIERAFPTGWQPRTDDGLAIAAAAVHGVLIKQATAGRSAWQ
SLGAWRAAGAGSGTGSTQVLLEDEQRCVHEVSVSPQVDSWRVCVGDRELTLAAVLVGDTL
ALQCDGLTVRFTVAVEQHAKQGERVWLSGLSGTWAWRRLDRWQRALKGAAGADEPGGNLL
LAPMPGLVTQVQVSVGMSVNAGDTLVQMEAMKMVHTLSAVAPGRVAELRCRVGDAVRGGD
VLAIMETIESEEKQ
NT seq 2025 nt   +upstreamnt  +downstreamnt
atgtttaacaccctcctgattgccaatcgcggggagatcgcctgccgcatcgcccgcacc
gcgcgccgcatgggcttgcgcacggtggcggtctattccgacgccgaccgcgaggcgctg
cacgtggccctgtgcgatacggccgtgcgcatcggagcgccggaggccgcgcgcagctac
cttgatgccgctgccatcgtggccgcggcgcgtgccgccggtgcgcaggccatccatccg
ggctacggctttttgtcggaaagcctggccctgattgacgcctgcgaagccgtcgggctc
atttttgtgggcccctcgcgcgaagcgattcggcgcatgggctcgaagatcgaatccaag
cgcatcgcgctcggagccggcgtgccggtggtgccgggctaccacgccgacgaccaggac
tctgcggtcttgcaggcggcggccgggggcatcggctacccggtgctgatcaaggcctcg
gccggcggcggcggcaagggcatgcgggtggtgcgcagcgcggctgacttctcggccgcg
ctggataccgtgcgacgcgaagcgaaggcttcgttcggcgacgaccgcgtgctgctggaa
cgctacctcgacgagccacgccacctcgaagtgcagttgctgggcgacaagcacgggcat
ctggtccatttgttcgagcgcgaatgttcgatccagcgcaaccaccagaaagtgattgag
gaagcgcccgcgccacacctgcctcccgccgtgcgcgaggccctgttttcgcacgcgctg
acgatcgggcacgccatcggctacgacagcaccggcaccatcgagttcatccacgacagc
cgcagcggcgacaccttcttcctggaaatgaacacccggctgcaggtcgagcacccggtg
accgagttgacggtcggtatcgatttggtcgaatggcagctgcgggtggccactggtgag
ccgctcggcttcgcccagccggacctgacgcagcgcggctgcgcgatcgaggcgcgtgtc
tgcgcggagaatccggcggcgggtttcgcgcccgagatcggcgccctgatcgactaccgc
gagccgcgcggcgagggcgttcgggtcgacagcggcatgcgcaacggcagtcacgttacg
ccttattacgactccatgctggccaaggtaattgcccatgccgacgaccggccgaccgcc
gcacggcggctcgccacggcattggacgacacggtgctgctcggcgtgcacagcaacctc
ggttttctggccgatctgctgcgccatgaccacttcgcgcaagtactcaccacacattac
atcgaacgcgcctttcccacaggctggcagccgcgcacggacgatgggctggccatcgcg
gctgccgccgtgcacggcgtgctgatcaaacaggcgacggccgggcgctcggcctggcag
tcgctcggggcctggcgcgcggccggcgctgggagtggcactggcagcacacaggtgctg
ctcgaagacgagcagcgctgcgtgcatgaagtcagcgtctcgccgcaggttgacagctgg
cgtgtgtgcgtcggcgatcgggagttgaccctggcggcggtattggtcggcgacaccctg
gcgttgcagtgcgacggcctgacggttcgcttcacggtggcggtggagcagcacgccaag
caaggcgaacgcgtgtggctctctggcctgagcggcacgtgggcctggcgccggctcgat
cgctggcagcgcgcactcaagggcgcggcgggtgccgatgagccgggcggcaatctcctg
ctcgcccccatgcccggtctggtgacgcaggtgcaggtcagtgtaggcatgagtgtgaac
gcgggcgacacgctggtgcagatggaagctatgaagatggtgcatacgctgagcgcggta
gcgccgggacgtgtggccgagctgcgttgccgcgtcggcgacgcggtgcgcggtggtgat
gtgctggcgatcatggaaacaatcgaatccgaggaaaagcaatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (41)   

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