KEGG   Hydrogenophaga sp. RAC07: BSY239_3552
Entry
BSY239_3552       CDS       T04455                                 
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
hyr  Hydrogenophaga sp. RAC07
Pathway
hyr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hyr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BSY239_3552 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hyr03400]
    BSY239_3552 (ruvB)
Enzymes [BR:hyr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BSY239_3552 (ruvB)
DNA repair and recombination proteins [BR:hyr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BSY239_3552 (ruvB)
    RecFOR pathway proteins
     BSY239_3552 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 Mg_chelatase AAA_14 AAA_3 nSTAND3 Rad17 AAA_22 AAA_16 AAA_18 RNA_helicase TsaE NTPase_1 AAA_33 AAA_17 DUF815 Sigma54_activ_2 AAA_28 bpMoxR AAA_19 NB-ARC ABC_tran AAA_24
Other DBs
NCBI-ProteinID: AOF85042
UniProt: A0A1B3LW10
Position
complement(3763969..3765027)
AA seq 352 aa
MSIQTDDFAPAPRMVSAAPASPKEEAIERALRPKLLDEYVGQVKVREQLEIFIGAAKKRN
EALDHVLLFGPPGLGKTTLSHIIAQELGVNLRQTSGPVLEKPKDLAALLTNLEANDVLFI
DEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSIKLDLQPFTLVGATTRAGMLTNPLR
DRFGIVARLEFYTSEELGRIVKRSAGLLNAPMDEEGGFEIARRSRGTPRIANRLLRRVRD
FAEVKGTGTITQDIANRALAMLDVDPQGFDLMDRKLLEAVIHRFDGGPVGLDNIAASIGE
ERDTIEDVIEPYLIQQGFLQRTPRGRIATLAAYRHLGVAPPTTDNGLFQPGN
NT seq 1059 nt   +upstreamnt  +downstreamnt
atgagcatccagaccgacgacttcgcccccgcgccgcgcatggtgtccgctgcgccggct
tcgccgaaagaggaggcgatcgagcgcgcgctgcggcccaagctgctcgacgagtacgtg
ggccaggtgaaggtgcgcgagcagctcgaaatcttcatcggcgcagccaagaagcgcaac
gaggcgctggaccacgtgctgctgttcggcccgccgggtctgggcaagaccacgctgagc
cacatcattgcgcaggaactcggcgtgaacctgcgccagaccagcgggccggtgctggaa
aagcccaaggacctggccgcgctgctgaccaacctcgaagccaacgacgtgctcttcatc
gacgagatccaccggctcagcccggttgtcgaagagatcctgtaccccgcgctggaggac
taccagatcgacatcatgatcggcgagggtccggcggcgcgcagcatcaagctcgatttg
cagcccttcaccctggtgggtgcgaccacccgcgccggcatgctcaccaacccgctgcgc
gaccgcttcggcatcgtcgcgcggctggagttctacacctcggaagagctgggccgcatt
gtcaagcgcagcgccggcctgctgaacgcgcccatggacgaagaaggtggcttcgagatc
gcgcgccgttcgcgcggcacgccgcgcatcgccaaccgcctgctgcgccgcgtgcgcgac
tttgccgaggtgaagggcacgggcaccatcacccaggacatcgccaaccgcgcgctggcc
atgctcgacgtggacccgcagggcttcgacctgatggaccgcaagctgctggaggctgtg
atccaccgttttgacggtggtccggtggggctggacaacatcgcggccagcatcggcgag
gagcgcgacaccattgaagacgtgatcgagccctatttgatccagcagggtttcttgcag
cgcacgccgcgcggtcgcatcgccacgctggcggcctaccggcacctgggtgtggcgccg
cccaccaccgacaacgggctgttccagcccggcaattga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (27)   
   Pfam (27)   
All databases (40)   

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