KEGG   Hydrogenobaculum sp. SN: HydSN_0365
Entry
HydSN_0365        CDS       T02516                                 
Name
(GenBank) type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit
  KO
K02469  DNA gyrase subunit A [EC:5.6.2.2]
Organism
hys  Hydrogenobaculum sp. SN
Brite
KEGG Orthology (KO) [BR:hys00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hys03032]
    HydSN_0365
   03400 DNA repair and recombination proteins [BR:hys03400]
    HydSN_0365
Enzymes [BR:hys01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     HydSN_0365
DNA replication proteins [BR:hys03032]
 Prokaryotic type
  DNA Topoisomerases
   HydSN_0365
DNA repair and recombination proteins [BR:hys03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      HydSN_0365
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C DUF3793
Other DBs
NCBI-ProteinID: AGH92989
Position
302914..305214
AA seq 766 aa
MEILEIPIEEEARQSYLDYAMSVIVGRAIPDVRDGLKPVQRRILYAMYEMDLTPDKPFKK
CARIVGDTMGRYHPHGDQAIYDALVRMAQDFNLRYPLVIGQGNFGSIDGDPPAAMRYTEA
KLSKITLSLLEDIENDTVDFVPNFDESVMEPQVLPAKMPNLLCNGTTGIAVGLATSIPPH
NLKEVCDALVALAQNQDITVEELMQYIKGPDFPTGGIIVGEVSPEVYKTGRGQVTVQAKA
RVEKTSSGREQIIITEIPYMVNKAELIKKIAELARSGKLKEISDLRDESDKEGIRIVIEL
KRDAKGEAVLKKLYKNTSLRKNFPINMVALVGLEPKLLNLKDILLEFFKHRLNVIYRRTE
FFLRKAEERLHIVEGLLICIKDIDKIIETIRASQDTQEAKEKLMNSWSLTEKQAQAILDL
RLQRLTSLETSKLQKEHDELIENIKTYKNILENKQERINIFIKETKELAERFKDPRRTFI
EGMIKEDTYVDVFVTRNGFVKPIELLEEEKSPIVNVASLKFTEGLFIVSNKGRVYWTAGS
EALSGSSIHMKDTDEYVVGAFVREQYNSRLLILTNKGSIKKIPLVEFEYKTQGFQILKLS
EGEEVVYISGSQDESEILILTKKGYINRIQTQDVGATTSSSKAIQCIKLNENDEAISVKA
LDDKVFGLLITEEGYAKKIKLEDIPKKSRTSQGINVLKQKFLNACDLIFYNDDDNFDVLI
STLNGSHIKLDIKSLIQRMKVPAGIGVPEEKVIDLKDDKIYRVVLL
NT seq 2301 nt   +upstreamnt  +downstreamnt
atggaaatattggaaatccctatagaagaagaggcaagacaatcttatcttgattatgcg
atgtctgttatagttggtagggctataccagacgttagagatggtcttaagccggttcaa
agaagaatactgtatgcaatgtatgaaatggacctaaccccagacaaaccctttaaaaaa
tgtgcccgtatcgtaggggatacgatgggaagatatcatccccatggagatcaagctata
tacgatgctcttgtaagaatggctcaggatttcaatcttagatatcctcttgtaatagga
cagggaaattttggttctatagatggagaccctcctgctgcaatgagatatacagaggca
aagctatctaaaataacccttagcttgttggaagatatagaaaacgatactgtagatttt
gtaccaaattttgatgagagtgtcatggaaccccaggttcttccggcaaagatgccaaac
ctcctttgtaatggtactacaggtatagcggtaggtcttgctacttctatcccccctcac
aatctaaaagaagtttgcgatgcgttggtggctttggctcaaaaccaagatataactgta
gaagagcttatgcaatatataaaaggaccagattttcccacaggcggtataatagtgggg
gaagtgtcgccagaggtttacaaaactggaagaggacaggttactgttcaagcaaaggca
agggtagaaaaaacaagctctggaagagaacaaataataataacagaaatcccttacatg
gtcaacaaagcagagcttataaaaaagatagcagaactagcaaggtctggtaagctaaaa
gagatttctgacttaagagacgaatctgacaaagaaggtataagaatagtaatagaacta
aagagagatgccaaaggagaggctgtattgaagaagctttacaaaaacacctcccttaga
aaaaactttcctataaatatggtggctttggtggggcttgagccaaagcttttaaatcta
aaagatattttgctggaatttttcaaacataggctaaatgtgatctatagaaggactgag
tttttcttaagaaaagccgaagaaagacttcatatagtagaaggacttttgatttgtata
aaagatatagacaaaattatagaaaccattagagcttcacaagatacccaagaggccaaa
gaaaaactcatgaatagctggagtctaactgaaaaacaagctcaggcaatacttgattta
agattgcaaagacttacatctttagaaacttctaagcttcaaaaagagcacgatgagctt
atagaaaatatcaaaacttataaaaatatattggaaaacaaacaagaaaggataaacatc
tttataaaagagacaaaagaacttgcagagcgtttcaaagatccaagaagaactttcatt
gaaggtatgataaaagaagatacctatgtggatgtttttgtcacgagaaatggatttgta
aaacctatagagcttttagaagaggaaaaatctcctattgttaatgtggcaagtttgaag
tttacagaaggtcttttcatagtatcaaataaaggaagagtttattggactgctgggtca
gaagctttgtctggaagctccattcatatgaaggataccgacgagtacgttgtaggtgcc
tttgtgagagagcaatacaactcaagacttcttatcttgacaaataaaggctctataaag
aagatacctcttgtggagtttgaatacaaaactcaaggctttcaaatattgaagctctca
gaaggtgaagaggtggtttatataagcggttctcaagatgagagcgaaatacttatttta
accaaaaaaggttatataaatagaattcaaacccaggacgtaggagccaccacatctagc
tcaaaagccattcaatgcataaagcttaatgaaaatgatgaggctatctcggtgaaagct
ttagatgacaaggtttttgggcttttaataacagaagaaggatacgctaaaaagataaag
ctagaggatattccaaaaaaatctaggacatctcaaggtataaacgtactaaagcaaaag
tttttaaacgcttgcgatttgatattttacaacgatgatgataattttgatgtgttgata
tccactttaaacggctctcatataaagcttgatattaaaagcttaatacagcgtatgaaa
gtacctgctggtataggtgtgcctgaggaaaaagtgattgatttgaaagatgacaagatc
tatagggtggtgttgttatga

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