KEGG   Hydrogenobaculum sp. SN: HydSN_1176
Entry
HydSN_1176        CDS       T02516                                 
Name
(GenBank) MutS2 family protein
  KO
K07456  DNA mismatch repair protein MutS2
Organism
hys  Hydrogenobaculum sp. SN
Pathway
hys03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hys00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    HydSN_1176
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hys03400]
    HydSN_1176
DNA repair and recombination proteins [BR:hys03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     HydSN_1176
SSDB
Motif
Pfam: MutS_V Smr MSSS Pox_A32 AAA_22 AAA_14 DUF848 ATG17_like IL32 HSCB_C
Other DBs
NCBI-ProteinID: AGH93763
Position
1057770..1060043
AA seq 757 aa
MREYELKKLEFHKIKENLKLRTHSVASLEYIENIKPIPKEELLQEQKLVECFMKLLRQRE
NILYSFDDISKSLKKAMIEESVLGIDEILSIYKVLKIIKDVRKFLVDALDRCDLFNKILK
DLGTFQTLEAEIERTIDPSGVVKSEASRDLFEIRKEIKQVEKTITEKLEALFQRPDSDIL
FSEKLITVRQNRYVVPVKTQSVKRIVGIVHGVSSSGFTTYLEPQIVVDLNNKLAVLRTEE
EKEIHLVLKKLTSFIRERANRLLESFNTLVKIDILMAKASFGIEYECSLPSIGDCIELLE
ARNPIMSILSQNPIPVDIILKDKKGLVLTGPNTGGKTVFLKTLGLSYIMFLHAIPIPASP
NSKLPIFDNIFVDIGDEQDISQSLSTFSSHIKNISEILQRSTEKTLILIDELGAGTDPLE
GSALGIAILDYIKKLNAFVVVSTHHTPIKLWAVNSDYYEPATLMFDRDTLRPLYKVLYGT
IGESMGIEVAKRFGIPKEVILEAQKLLGENTLEYQGVMENLNRLVREYQDKMEILEKHRE
ELELLKRKYESLVEEMEKAKEDAWKNAAKEAQNYLEQLKKEAQEFLVGLKEKASLKDFIK
QKQEELKKLEKEEEQQIEVGDWVEFMGGKGRVLEIRQDKAQVMFGDIKAWIKLKDLSKTA
KIPRTHTINISLQKFENKKAGMPEINLTGLSVEEAISKLDKFLDSAFASGVKMAKVIHGV
GVLKKAVTDYLSSSSYVVFYRDAYPKEGGPGTTIVYF
NT seq 2274 nt   +upstreamnt  +downstreamnt
atgagagaatatgagcttaagaagttagagtttcacaagataaaagaaaatctgaaattg
aggacgcattctgtagcaagtttagagtatatagaaaatataaaacctatcccaaaagag
gaacttttacaagaacaaaagcttgttgaatgttttatgaagcttttaagacaaagagaa
aacatattgtatagctttgatgatatttctaaaagcctaaaaaaagcaatgatagaagaa
agtgttttaggaatagacgaaatacttagcatatacaaagttttaaaaattataaaagat
gtaagaaaatttttagtggatgccttagataggtgcgatttatttaataaaatactaaaa
gatttaggcacgtttcaaaccttagaagctgaaatagaaagaaccatagatccttctggc
gttgtaaaatcagaagcctctagggatctttttgagataagaaaagaaataaagcaagta
gaaaaaactatcacagagaaactagaagctcttttccaaagaccagatagtgatatacta
ttttctgaaaagcttataacagtaagacaaaatagatatgtagtgcctgtaaaaacccaa
agcgtcaaaaggatagtggggatagtgcatggtgtttcttcttctggttttaccacatat
ttagagccccagatagtggtggatttaaacaacaagcttgcagttttaagaacagaggaa
gaaaaagagatacatcttgtattaaaaaaactcacttcttttataagagaaagggcaaat
agacttttagaatcttttaatacgcttgttaaaatagatattctgatggcaaaagcatcc
tttggcatagaatacgagtgctcattgccttctattggcgattgtatagagcttttagaa
gcaagaaatccaattatgagcattttatctcaaaatcctattccagtggatataatttta
aaagacaaaaaagggcttgtgcttacagggccaaacaccggcgggaaaaccgttttccta
aaaacccttggacttagctatatcatgtttttacacgctatacctatacctgcctcacct
aatagcaaactgcctatttttgacaatatttttgtggatataggagatgaacaagacata
tcacagtctttatcgactttttcttctcatataaaaaatatctcggagattttacaaaga
tccacagaaaaaacactgatactgatagacgaattaggagctggcacagacccactggag
ggttctgctcttggtatagcaatccttgattatataaagaagttaaacgcttttgtagtg
gtttccactcatcacacacccataaagctttgggcggtaaattctgattattacgaaccg
gctacgttgatgtttgatagggataccctaagacctctttacaaagtgctttatggtacc
attggagaaagcatgggtatagaagtagccaaaaggtttgggataccaaaggaggttatt
ttagaagcccaaaaacttcttggagagaatactttggaataccaaggtgttatggaaaac
ttaaataggcttgtcagagaataccaagataaaatggaaatattggaaaaacatagagag
gagcttgagcttttaaaaagaaaatatgaatctctcgtagaagaaatggaaaaagccaaa
gaagatgcatggaaaaatgccgcaaaagaggctcaaaactatttggaacaacttaagaaa
gaagctcaggaatttttggttggtcttaaagaaaaagctagtttaaaagattttataaaa
caaaagcaagaagagttaaaaaagttggaaaaagaagaagagcagcaaatagaagtagga
gattgggtagagtttatgggtggaaaaggtagggttttagaaataaggcaagacaaagct
caggtgatgtttggtgatataaaggcttggataaagctaaaagatctttcaaaaaccgcc
aaaataccaagaacccacactataaatataagcttacaaaagtttgaaaataaaaaagca
ggtatgccagagataaatttaaccgggctttcagtagaagaagctataagcaaacttgat
aaatttttagatagcgcttttgcaagtggagttaaaatggcaaaagtaatacacggtgtt
ggagtgcttaaaaaagctgtaacagactatctttcgtcatcttcttacgttgtattctac
agggatgcctacccaaaagaaggtggacctggtaccaccatagtatatttttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (17)   

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