KEGG   Ignavibacterium album: IALB_0585
Entry
IALB_0585         CDS       T01943                                 
Name
(GenBank) Exoribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
ial  Ignavibacterium album
Pathway
ial03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ial00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    IALB_0585
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ial03019]
    IALB_0585
   03016 Transfer RNA biogenesis [BR:ial03016]
    IALB_0585
Enzymes [BR:ial01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     IALB_0585
Messenger RNA biogenesis [BR:ial03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     IALB_0585
Transfer RNA biogenesis [BR:ial03016]
 Prokaryotic type
  tRNA degradation factors
   IALB_0585
SSDB
Motif
Pfam: RNB CSD2 OB_RNB S1 OB_Dis3 Rep3_N IES5 DUF1918 RPAP1_C
Other DBs
NCBI-ProteinID: AFH48297
UniProt: I0AH40
Position
650978..653074
AA seq 698 aa
MKKELKAFFRKNPGRSFKAKEIARHLNANSDHQYEALKSALNKLYDEKFLTRTGKRFKLN
QIPSTNKITGTLELTEGGYGFVIPDNRKLSDIFIAARNLGTAFDGDKVEVILFAKQKGRN
LEGQIVNVLSRKRKEYVGILKKEKSLYYITPDEPSIHRDIYIDPQKLYSAKVGDKVVVGN
LLWESPTQNPIGEIIEVLGKPGSLDTEITSIAKEFGLKYRFPANVVNESEEIVFEITTND
LKQRIDFRQKNVITIDPEDAKDFDDALSIEKNEKGNFIVGIHIADVSHYVDYDSYLDQEA
QQRGNSVYLVGRVIPMLPENLSNNICSLVPNEDRLTYSVIVEMTPRGRIVDYQIKKTVIN
SKRRFNYDEVQKIIETGEGDFAEDILNLDTLAKILRRKRMKEGSFDFNTLEVKFKLDEYG
IPLEAYIKSMKDSNMLVEEFMLLANKIVAQHIALPKRGEAKPFVYRVHDLPDQEKIMEFV
RFVKSLGYQVSQNLIKKTSEFQKLLDQVKGKEEEPLINELAIRSMAKAFYSPTNIGHYGL
GFKYYTHFTSPIRRYSDLLVHRLLFKYIENPQLPGYTLEELEEICEHISACERTAMEAER
YSVKLKQVELLSNRVGDEFHAIISGVVHFGIFVKITDILAEGLIRLRNLDDDFYIYDEKK
YAIIGKRTKKMYRLGDKVIVKLVRVNEERLELDFLIVE
NT seq 2097 nt   +upstreamnt  +downstreamnt
atgaaaaaagaattaaaagcattcttcagaaaaaatcccggcagatctttcaaagcaaaa
gaaattgccagacacttaaatgcaaactctgatcatcagtatgaagcattaaaaagcgca
ttgaataaactttatgatgaaaaatttctcacacgaaccggcaagagattcaagcttaat
caaataccttcaacaaataaaataactggcacactcgagttgactgaaggtggttatgga
ttcgtgattccggataaccgcaaactaagcgacatttttatcgctgccaggaatcttgga
accgcattcgatggtgataaagttgaagttatactttttgcaaaacagaaaggaagaaat
cttgaaggtcagattgttaatgttctttcaagaaagcgtaaagaatatgttggaattctt
aaaaaagaaaaatcactttattacatcactcctgacgaaccttcaatccatcgtgatatt
tatatagacccacaaaaactttactcagcaaaagtaggtgataaagttgttgtcggaaat
cttctgtgggaatctccaacacagaatccaatcggagaaattattgaagtacttggaaaa
ccaggttcgcttgatacggaaataacttcaattgcaaaagagttcgggttgaaataccgg
tttccggcaaatgtagtaaatgaatctgaagaaattgtctttgaaattactacgaatgac
ttgaaacaaagaattgacttccgacagaagaatgtaataacaattgatcccgaagatgca
aaagattttgatgatgcattatcaattgagaaaaatgaaaaaggaaatttcattgttgga
attcacattgcagatgtttcccactatgttgattatgattcatatcttgatcaggaagct
cagcaaagaggaaacagtgtttatctcgttggcagggttataccaatgcttcctgaaaat
ctttccaacaacatttgttcacttgttcccaatgaagaccgtcttacttattctgtaatt
gttgaaatgactccgagaggaagaattgttgattatcagataaaaaagaccgtcatcaat
tctaaaagaagatttaattatgatgaagttcagaaaataattgagacaggtgaaggagat
ttcgctgaagatatactgaaccttgatacgcttgctaaaatattaagacgcaagcgaatg
aaagaaggaagttttgattttaatactctcgaagtaaaatttaaacttgatgaatatggc
ataccacttgaagcttacattaagtccatgaaagacagtaatatgcttgttgaagagttt
atgcttcttgccaacaaaattgttgcacaacatattgctttacccaaaagaggagaagca
aaaccatttgtttatcgtgttcacgatttgcctgatcaggaaaagattatggagttcgta
agatttgttaaatcacttggttatcaggttagtcagaacttaattaaaaaaaccagtgag
tttcagaagttacttgatcaggtgaaagggaaagaagaagagccactaatcaatgaactt
gcaattcgttcaatggcaaaagcattttattcaccgacaaatatcggacattatggatta
ggatttaaatattacacgcactttacttcaccaatcagaagatatagtgatttgcttgtt
cacagacttttgttcaaatatattgaaaatccacaactgcctggctatactcttgaagaa
cttgaagaaatttgtgaacatatctctgcttgtgaaagaacagcaatggaagccgaaaga
tattcggttaaacttaagcaggttgaattattgtcaaatcgtgtgggagatgaatttcac
gctatcatttctggtgtagttcattttggaatctttgtgaaaatcactgatattcttgca
gaaggacttatcagattgagaaatttagatgatgatttttacatttatgatgaaaagaaa
tatgctataatcggaaagagaactaaaaaaatgtatagacttggagataaagtaattgtt
aaacttgtaagagtaaatgaagaaagacttgaattggactttctcattgttgaataa

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