KEGG   Intestinimonas butyriciproducens: IB211_00531c
Entry
IB211_00531c      CDS       T04182                                 
Name
(GenBank) Excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
ibu  Intestinimonas butyriciproducens
Pathway
ibu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ibu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    IB211_00531c
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ibu03400]
    IB211_00531c
DNA repair and recombination proteins [BR:ibu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     IB211_00531c
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      IB211_00531c
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 RsgA_GTPase nSTAND1 AAA_29 AAA_25 AAA_21 AAA_22 nSTAND3 APS_kinase Zn-ribbon_8 cobW DnaJ_CXXCXGXG Viral_helicase1
Other DBs
NCBI-ProteinID: ALP92926
UniProt: A0A0S2W0P5
Position
complement(512039..514864)
AA seq 941 aa
MLDHISVKGARANNLKNIDVTIPRDKLVVLTGLSGSGKSSLAFDTIYAEGQRRYVESLSS
YARMFLGQMEKPDVDYIDGLSPAISIDQKTTSKNPRSTVGTVTEIYDYLRLLWARVGTPH
CPKCGKEIRQQTVDQIIDQVMTLPEATRIQVMAPVIRGKKGEHQKIFEDARKSGYVRVRC
DGSIYDLTEEIKLDKNRKHSIEVVVDRLVIKEDVARRLTDSVETAAGLSGGLVVINIVSE
DRDLLFSQNYACEDCGISIEELAPRMFSFNNPFGACPTCTGLGSQLKVDPALIIPNPGLS
ILEGAISASGWNNVKGDSISRMYFEALAKQYGFKLTTPVKDLPPEVLDVILYGTKGEKLK
LTYDRAQGQGTLYQAFEGVVNNLERRYRETQSDAMRRELEDCMSERPCPDCGGKRLRKEA
LAVTVGGISIHDFCQMSVTQALDFVGGLELSPQKLLIAERILKEIKSRLGFLQSVGLQYL
TLSRSAGTLSGGESQRIRLATQIGSSLMGVLYILDEPSIGLHQRDNDKLLATLKRLRDLG
NTLLVVEHDEDTMRAADYIVDIGPGAGVHGGEVVACGTAEEVMNTPGSITGDYLSGRRKI
PVPAERRKGSGKFLTVRGAAENNLRHVDVSIPLGTFTCVTGVSGSGKSSLVNEILYKKLG
ADLNRVKVRAGRHDAIEGEEYLDKVIDIDQSPIGRTPRSNPATYTGLFNDIRDLFASTPD
AKARGYGPGRFSFNVRGGRCEACSGDGLIKIEMHFLPDIYVPCEVCKGKRYNRETLEVKY
KGKNIYEVLDMTVDEALPFFENLPRIYNKLQTLYDVGLSYVKLGQPSTELSGGEAQRVKL
ATELAKRATGRTIYILDEPTTGLHTYDVHKLIEVLQRLVDAGNSVVVIEHNLDVIKTADY
VIDLGPEGGDGGGTIVCTGTPEEVARCEASYTGQYLKTVLK
NT seq 2826 nt   +upstreamnt  +downstreamnt
atgctagaccacatctccgtcaaaggcgcccgggccaacaacctgaaaaacatcgacgtc
accatcccccgggacaagctggtggtgctcacgggcctctccggctccggcaagtcctcc
ctggccttcgacaccatctacgcagagggccagcgccggtacgtggagtccctctcctct
tacgcccggatgttcctgggccagatggaaaagcccgacgtggactatatcgacggcctc
tcccccgccatctccatcgaccagaagaccacctccaaaaacccccgctccaccgtgggc
accgtcaccgagatctatgactatctccgcctgctgtgggcccgggtgggcaccccccac
tgccccaagtgcggcaaggagatccggcagcagaccgtggaccagatcatcgatcaggtg
atgaccctgccggaggccacccgcatccaggtcatggcccccgtcatccggggcaagaag
ggcgagcatcagaagatcttcgaggacgcccggaagtctggctacgtccgggtccggtgt
gacgggtccatctacgacctcaccgaggagatcaagctggacaagaacaggaagcacagc
atcgaggtggtggtggaccggctggtcatcaaagaggacgtcgcccgccgcctcaccgac
tcggtggagaccgccgccggcctctccggcggcctggtggtcatcaatatcgtaagcgag
gaccgggaccttctcttctcccagaactacgcctgcgaggattgcggcatctccatcgaa
gagctggccccccgcatgttctccttcaacaaccccttcggcgcctgtcccacctgtacc
ggtctgggcagccagctcaaagtggaccccgccctcatcatccccaaccccggtctctcc
attctggagggcgccatctccgcctcgggctggaacaacgtgaagggggactccatctcc
cgcatgtattttgaggcgctggccaagcagtacggcttcaagctcaccaccccggtgaag
gatctgccccccgaggtgctggacgtcatcctctacggcaccaaaggggagaagctgaag
ctcacctacgaccgcgcccagggccagggcaccctgtaccaggcctttgagggcgtggtc
aacaatctggagcgccgctatcgggagacccagtccgacgccatgcgccgggagctggag
gactgcatgtccgagcgcccctgccccgactgcggcggcaagcgactgcggaaagaggcc
ctggccgtcaccgtgggcggcatcagcatccacgacttctgtcagatgtcggtgacccag
gccctggacttcgtaggcgggctggagctctctccccagaagctgctcatcgccgagcgc
atcctcaaggagatcaagagccgcctgggctttctccagtcggtgggcctccagtatctg
accctcagccgctccgccgggaccctctccggcggcgagagccagcgcatccgcctggcc
acccagatcggctcctccctcatgggggtcctctatatcctggacgagccctccatcggc
ctccatcagcgggacaacgacaagctgctggccaccctcaagcggctgcgggacctgggc
aacaccctgctggtggtggagcacgacgaggacaccatgcgcgcagcggactatatcgtg
gatatcggccccggagccggggtccacggcggcgaggtggtggcctgcggcacggccgag
gaggtcatgaacacccccggctccatcaccggcgactacctctccgggcggcggaaaatc
cccgtcccggcggagcgccggaagggcagcggaaaatttctcaccgtccggggggcggcg
gagaacaacctgcggcacgtggacgtgtccatccccctggggaccttcacctgcgtcacc
ggtgtgtccggctccggcaagtcctccctggtcaatgagatcctctacaaaaagctgggg
gccgatctcaaccgggtgaaggtccgcgccggcaggcacgatgccatcgagggggaggag
tatctggacaaggtcatcgacatcgaccagtcccccatcggccgtacgccccgctccaac
cccgccacctacaccggcctcttcaacgacatccgggacctcttcgcctctacccccgac
gccaaggcccggggctacgggccgggccgcttctccttcaacgtacggggcgggcggtgc
gaggcctgctccggagacggcctcatcaagatcgagatgcacttcctcccggacatctac
gtcccctgcgaggtctgcaagggtaagcgctacaaccgggagaccctggaagtcaagtat
aagggcaagaacatctacgaggtgctggatatgaccgtggacgaagccctgcccttcttt
gaaaatttgccccgcatctacaacaagctccagactctttacgacgtgggcctctcctat
gtgaagctgggccagccctccaccgagctctccggcggcgaggcccagcgggtgaagctg
gccacggagctggccaagcgagccacgggccggaccatctatatcctggatgagcccacc
acgggcctgcacacctacgacgtccacaagctcatcgaggtgctccagcgcctggtggac
gcagggaactccgtcgtggtcattgagcacaacctggacgtcatcaagacggcggactat
gtcatcgacctgggccccgagggcggcgacggcggcggcaccatcgtctgcaccggcacg
ccggaggaggtggcccggtgtgaggccagctacaccggccagtacctgaagaccgtgctc
aagtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (245)   
   KEGG ORTHOLOGY (1)   
   RefGene (242)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (267)   

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