KEGG   Intrasporangium calvum: Intca_0009
Entry
Intca_0009        CDS       T01385                                 
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
ica  Intrasporangium calvum
Brite
KEGG Orthology (KO) [BR:ica00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ica03032]
    Intca_0009
   03400 DNA repair and recombination proteins [BR:ica03400]
    Intca_0009
Enzymes [BR:ica01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Intca_0009
DNA replication proteins [BR:ica03032]
 Prokaryotic type
  DNA Topoisomerases
   Intca_0009
DNA repair and recombination proteins [BR:ica03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Intca_0009
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3
Other DBs
NCBI-ProteinID: ADU46571
UniProt: E6SDW8
Position
10916..13030
AA seq 704 aa
MSDAAETTADSTNRPNVDHRPNGVDYDASAITVLEGLEAVRKRPGMYIGSTGERGLHHLV
YEIVDNSVDEALAGYADTIDITLLADGGVRVKDNGRGIPTDIHPVEKMSAVELVLTQLHA
GGKFGGGGYKVSGGLHGVGSSVVNALSTTLKVAVRQKGYVHRMSFTMGVPDGPLRREEAT
DETGTTITFWPNAEIFDSVDFDFETLRARLQQMAFLNKGLTLNLVDERVDQRAEASEDVD
LDGVESDLATVVEDGDNGHDVPTSGRKTLTAKTATYRYDGGLVDYVNHLNSSKRSEPVHP
EVIAIEVEDEARSLSLELAMQWTSAYSESVHTYANTINTHEGGTHEEGFRAAMTKLINDF
ARKQNLLKEKDENLTGDDVREGLTAVISVKLGDPQFEGQTKTKLGNSEVKGFVQRAMTDE
FGHWLETHPNEGKDIVRKSIQAAAARMAARKAREATRRKGLLESGGLPGKLKDCQSKDPS
LSEVFIVEGDSAGGSATQARNPHIQAILPIRGKILNVEKARIDKILANQEVQALISAFGT
GIGEDFDLAKARYHKIILMADADVDGMHIRTLLLTLLFRFMRPLIEAGYVYLAQPPLFRL
RWSNAPHQFAYSDRERDGLTELGKANGWRLPKDNPVQRYKGLGEMNYQELGETTMDQSTR
TLLQVTLDDAAKADEVFAVLMGEDVESRRTFIQKNARDVRFLDI
NT seq 2115 nt   +upstreamnt  +downstreamnt
gtgtcagacgccgccgagacgaccgccgacagcaccaaccgaccgaacgtcgaccatcgt
cccaacggagtcgactacgacgcgagtgcgatcaccgtcctcgaggggctcgaggcggtg
cgcaagcgcccggggatgtacatcggctcgaccggtgagcgggggctgcaccacctcgtc
tacgagatcgtcgacaactccgtcgacgaggcgctcgccggctacgccgacacgatcgac
atcaccctgctcgccgacggcggggtccgggtcaaggacaacgggcgtggcattcccacc
gacatccacccggtcgagaagatgagcgcggtcgagctggtgctcacccagctgcacgcg
ggcgggaagttcggcggcggcggctacaaggtgtccggcggcctgcacggcgtcggctcg
tccgtcgtcaacgccctgtcgaccacgctcaaggtcgcggtccggcagaagggctacgtc
caccggatgagcttcaccatgggggtgccggacggtccgctccgccgggaggaggccacc
gacgagaccggcacgacgatcaccttctggcccaacgccgagatcttcgacagtgtcgac
ttcgacttcgagacgctgcgtgcccgtctccagcagatggccttcctcaacaagggcctg
accctcaacctcgtcgacgagcgggtcgaccagcgtgccgaggcctccgaggacgtggac
ctcgacggagtggagagcgacctcgcgacggtggtcgaggacggcgacaacggccatgac
gtccccacgagcgggcggaagaccctgacggccaagacggccacctaccgctacgacggc
ggcctcgtcgactacgtcaaccacctcaactcctccaagcgcagcgagcccgtgcatccc
gaggtgatcgccatcgaggtcgaggacgaggcgcgctccctgtccctcgagctggcgatg
cagtggaccagcgcctacagcgagtcggtgcacacctacgcgaacacgatcaacacccac
gagggcggcacccacgaggagggcttccgtgcggcgatgaccaagctcatcaacgacttc
gcgcgcaagcagaacctcctcaaggagaaggacgagaacctcaccggcgacgacgtccgg
gaaggcctcaccgcggtcatctcggtcaagctcggtgacccccagttcgagggacagacc
aagacgaagctcggcaactccgaggtcaagggcttcgtccagcgcgccatgaccgacgag
ttcgggcactggctcgagacccaccccaacgagggcaaggacatcgtccgcaagtcgatc
caggccgcggccgcccggatggcggctcgcaaggctcgcgaggcgacccggcgcaagggc
ctgctcgagtccgggggcctgccgggcaagctcaaggactgccagagcaaggacccgagc
ctctccgaggtgttcatcgtcgagggtgactccgccggggggtcggcgacgcaggcccgc
aacccgcacatccaggcgatcctgccgatccgcggcaagatcctcaacgtcgagaaggcc
cggatcgacaagatcctcgccaaccaggaggtccaggcgctgatctcggccttcggcacg
ggaatcggcgaggacttcgacctcgccaaggcccgctaccacaagatcatcctgatggcc
gacgccgacgtcgacgggatgcacatccgcaccctcctgctgacgctgctcttccgcttc
atgcggccgctcatcgaggccggctacgtctacctggcccagccgcccctgttccgtctc
cggtggagcaatgccccacaccagttcgcctactccgaccgggagcgggacggtctcacg
gagctgggcaaggcgaacggctggcgcctgccgaaggacaaccccgtccagcggtacaag
ggcctcggcgagatgaactaccaggagctcggcgagacgaccatggaccagagcacccgc
acgctgctccaggtgaccctcgacgacgcggccaaggccgacgaggtgttcgcggtgctc
atgggtgaggacgtcgagtcacggcggaccttcatccagaagaacgcccgggacgtgcgg
ttcctcgacatctga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (21)   

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