KEGG   Intrasporangium calvum: Intca_2220
Entry
Intca_2220        CDS       T01385                                 
Name
(GenBank) AMP-dependent synthetase and ligase
  KO
K01897  long-chain acyl-CoA synthetase [EC:6.2.1.3]
Organism
ica  Intrasporangium calvum
Pathway
ica00061  Fatty acid biosynthesis
ica00071  Fatty acid degradation
ica01100  Metabolic pathways
ica01212  Fatty acid metabolism
ica02024  Quorum sensing
Module
ica_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:ica00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    Intca_2220
   00071 Fatty acid degradation
    Intca_2220
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Intca_2220
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:ica01004]
    Intca_2220
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ica04147]
    Intca_2220
Enzymes [BR:ica01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     Intca_2220
Lipid biosynthesis proteins [BR:ica01004]
 Acyl-CoA synthetase
  Long/very long chain acyl-CoA synthetase
   Intca_2220
Exosome [BR:ica04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   Intca_2220
  Exosomal proteins of breast cancer cells
   Intca_2220
SSDB
Motif
Pfam: AMP-binding Phage_Mu_Gp48
Other DBs
NCBI-ProteinID: ADU48729
UniProt: E6SE81
Position
complement(2480567..2482426)
AA seq 619 aa
MPLQSVADRDVDQAVLDNRAPSVGALFRSRVQATPDRPAYLYFKDGGSELTTLTWRQTHD
IVQEWAAGLISLGVELEDRVAIASATSLPWVLADLAIVCAGAATTTVYPTTIADDVAYIL
TDSGSVLVFAEDDAQIAKLTDRRADIPHVKHVIAMSGRGSDDGWVITTDDLAAKGRELLA
STPDAVDARIDQLGPESLAVVIYTSGTTGRPKGVRLVQDSVVYEGALIQATGTVTEDDLQ
FLWLPLSHVFGKMLLALGLQIGFPTAVDGRLDKIVDNMAIIKPTFMAGPPRIYEKARGRV
ALMLAQETGVKKKLIDWAFKVGAEMRDVLEQGETPSSGLTLRHRLVTKLVLHKIQERFGG
RVRFMISGSAPLNAEVAKWFGAAGLLLVEGYGLTETSSGTTVNLPRPGCYRYGSVGWPMP
DTEVAIAEDGEILVKGPGVMRGYHNSPEATAEVLDADGWFHTGDIGRIDEHGFVYVTDRK
KDFFKTSGGKYIAPAEIEAKFKGMCVYVSQFLVHGAGHNFATALVTLDPDAIAGWAAANG
MAGRPYAEIVTSDAARELVQGYVDKLNDSLNRWETIKKFTILDHDLSIEMGDLTPSMKLR
RRAVVDKYQDQLDALYQED
NT seq 1860 nt   +upstreamnt  +downstreamnt
atgcccctgcagtccgtcgccgatcgcgacgtcgaccaagcggtcctcgacaaccgggcc
ccgagcgtgggcgccctgttccgcagccgcgtccaggccacccccgaccgtcccgcctac
ctctacttcaaggacggggggagcgagctcaccacgctgacgtggcgccagacccacgac
atcgtccaggagtgggccgccggtctgatcagcctcggcgtcgagctcgaggaccgcgtc
gccatcgcgtccgccacgagcctgccctgggtgctcgccgacctcgcgatcgtgtgcgcc
ggcgccgcgacgacgaccgtctacccgacgacgatcgccgatgacgtcgcctacatcctc
accgactccggcagcgtcctggtcttcgcggaggacgacgcccagatcgccaagctcacc
gaccgccgcgccgacatcccgcacgtcaagcacgtcatcgccatgtccgggcgaggcagc
gatgacggctgggtcatcacgaccgacgatctggctgccaaggggcgggagctgctcgcc
tcgacgcccgacgccgtcgacgcgcggatcgaccagctgggccccgagagtctcgccgtc
gtcatctacacgtccggcaccaccggtcggcccaagggcgtccgcctcgtccaggacagc
gtggtctacgagggcgcgctcatccaggcaaccggcacggtcacggaggacgacctccag
ttcctctggttgccgctctcacacgtcttcggcaagatgctcctcgccctcggcctccag
atcgggttcccgacggcggtggacggccggctggacaagatcgtcgacaacatggcgatc
atcaagcccaccttcatggccggaccgccccggatctacgagaaggctcgcggtcgggtc
gcgctcatgctcgcccaggagacgggggtcaagaagaagctgatcgactgggcgttcaag
gtcggggcggagatgcgtgacgtcctcgagcagggcgagacgccgtcgtccggactcacc
ctccggcaccggctcgtcaccaaactggtcctgcacaagatccaggagcgcttcggcggc
cgggtccgcttcatgatcagcgggtcggcgccgctcaacgccgaggtcgccaagtggttc
ggagcagcgggcctgcttctcgtcgagggctacggcctcaccgagacgtcctcgggcacg
accgtcaacctcccccggccgggctgctaccggtacggctcggttggctggccgatgccc
gacaccgaggtcgcgatcgccgaggacggcgagatcctcgtcaagggcccgggcgtcatg
cgcggctatcacaacagccccgaggccaccgcggaggtcctcgacgccgacggatggttc
cacaccggcgacatcggccggatcgacgagcacggattcgtctacgtcaccgaccgcaag
aaggacttcttcaagacctccggcggcaagtacatcgccccggccgagatcgaggcgaag
ttcaagggcatgtgcgtctacgtcagccagttcctcgtccacggagcgggccacaacttc
gccaccgcgctggtgactctcgacccggatgcgatcgctggctgggcggcggcgaacggt
atggcgggccggccctatgcggagatcgtcacgtccgacgctgcccgtgagctcgtgcag
gggtacgtggacaagctgaacgacagcctcaaccggtgggagacgatcaagaagttcacg
atcctcgaccacgacctgagcatcgagatgggcgacctgactccgagcatgaagctgcgc
cgccgcgctgtcgtcgacaagtaccaggaccagctcgacgccctctaccaggaggactga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (39)   

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