KEGG   Candidatus Ishikawaella capsulata: ICMP_357
Entry
ICMP_357          CDS       T04149                                 
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
  KO
K00566  tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
Organism
icp  Candidatus Ishikawaella capsulata
Pathway
icp04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:icp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    ICMP_357 (trmU)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:icp03016]
    ICMP_357 (trmU)
Enzymes [BR:icp01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.13  tRNA-uridine 2-sulfurtransferase
     ICMP_357 (trmU)
Transfer RNA biogenesis [BR:icp03016]
 Prokaryotic type
  tRNA modification factors
   Thiolation factors
    ICMP_357 (trmU)
SSDB
Motif
Pfam: tRNA_Me_trans tRNA_Me_trans_C tRNA_Me_trans_M NAD_synthase ThiI QueC Gemini_AL1 Spo16_N Arginosuc_synth Asn_synthase ATP_bind_3
Other DBs
NCBI-ProteinID: BAH83210
UniProt: C5WD04
Position
412361..413449
AA seq 362 aa
MKKVIVGMSGGVDSSVSAWLLKQQGYQVEGVFMKNWEEDDTKDFCNSAKDLVDAQLVCDK
IGINLKTVNFSAEYWEYVFKIFLDEYKNGQTPNPDILCNKEIKFKVFLNFSQCILKADYI
ATGHYVRIQTKQGKKYLLRGIDNKKDQSYFLYTLTHKQLEKILFPLGDKKKSEVRNIAVA
LDLPIANKKDSVGMCFIGKRKFREFLKRYIPINPGVIETIDGKIIGQHEGIMYYTIGQRR
GLCIGGIKNNPNSNPWYVVDKDVIYNRLIVTQDSNDSHLMSNGVIAHKIHWIDGRRLTKD
IYCSLKTRYQETDTLCKISPINEDTIAVYFNEPIRAVTPGQSAVFYVGEICIGGGIIKNR
IP
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgaaaaaagtcattgtaggtatgtcaggaggtgtagattcttctgtatctgcttggtta
ttaaagcagcaaggctatcaagtagaaggtgtatttatgaaaaactgggaagaggatgat
actaaagatttttgtaattcagccaaagatttagtcgatgctcagttagtttgtgataaa
ataggtataaatttaaaaacagtaaacttttcagcagaatattgggaatatgtttttaag
atatttcttgatgaatataaaaatggtcagactcctaatccagatattctatgtaataaa
gaaattaaatttaaagtcttcttaaatttttcacaatgtattttaaaagctgattatatt
gctactggtcattatgtacgtattcaaacaaaacaaggtaaaaaatatcttttaagaggc
atagataataaaaaagatcagagctattttttatatactctaactcataaacagttagaa
aaaattctgtttcctcttggtgataaaaaaaaatcagaagtaagaaatatagcagtagca
ttagatctacctatagcaaataaaaaggattctgtaggtatgtgttttataggtaaaaga
aaatttcgagaatttttaaaaagatatatccctataaatcccggcgtcattgaaactatt
gatggtaaaataattggccaacatgaaggaattatgtattatactataggacaaagaaga
ggattatgtatcggaggaataaaaaataatcccaacagtaatccatggtatgtagtagat
aaagatgtaatctataatcgtttaattgtgacacaagattctaatgattcgcatttaatg
tcaaatggggtgattgcccataagattcattggatagatggtagacgtcttacaaaagat
atttactgttccttaaaaactagatatcaggaaacagatactttatgtaagattagtcct
ataaatgaagatactatagcagtatattttaatgaacctataagggctgtaactcctgga
caatcagcagtattttatgttggtgaaatatgtataggtggtggtataattaaaaatcgc
attccataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (33)   

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