KEGG   Idiomarina sp. OT37-5b: C5610_11060
Entry
C5610_11060       CDS       T05379                                 
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
  KO
K03151  tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
Organism
idt  Idiomarina sp. OT37-5b
Pathway
idt00730  Thiamine metabolism
idt01100  Metabolic pathways
idt01240  Biosynthesis of cofactors
idt04122  Sulfur relay system
Module
idt_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:idt00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    C5610_11060
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    C5610_11060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:idt03016]
    C5610_11060
Enzymes [BR:idt01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.4  tRNA uracil 4-sulfurtransferase
     C5610_11060
Transfer RNA biogenesis [BR:idt03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    C5610_11060
SSDB
Motif
Pfam: ThiI THUMP Rhodanese QueC tRNA_Me_trans
Other DBs
NCBI-ProteinID: AVJ57392
UniProt: A0A2S0IPG8
Position
complement(2335680..2337146)
AA seq 488 aa
MKFVARLHAEITIKSRTVRKRHGKVLTNNLRKVLARDDADVYVKWLWDRIEVTATAHAGA
SSTDVRRTISEGLACTPGISWFAEVEERELSDFDSIATWVGAHWIEQLHGKSFAVRVKRK
GHHDFNSQQLERYLGGYLLKQTQGSRVQLKDADVEIPIQITDNIVHLVGKRQQGLGGFPI
PTQETVVSLMSGGFDSSVASFEFIRRGARTHFCFFNLGGDAHEVAVRQISHYLWQRYSSS
HPIKFVSIDFAPVVEDILTHCDNGLMGVVLKRQMLRAAERVARYLKAQALVTGEAIGQVS
SQTLSNLRVIDAATDAVVLRPLITRDKQEIVDIAKQIGTEPLAKSIPEYCGVISVKPTVR
APVDDVHAEEAKLDMSLLKRVVDDAQVLSMADIAAQAAEKTELQPSAVEEGTERVIIDIR
NQDEIDEQPLSVDLQVKEIPFFKLQSEFVKLDASTHYLLYCSQGVMSKMQALLLQESGHT
NVSVYKPE
NT seq 1467 nt   +upstreamnt  +downstreamnt
atgaaatttgtcgcacgcttacacgcagaaatcaccattaaaagccgcacggtgcgaaaa
cgccacggcaaggttctaacgaataatctgcgcaaggtgttggcccgggacgatgccgat
gtttatgtaaagtggctttgggatcgcatcgaagtgacggccaccgcacacgctggcgca
tcctcaaccgacgtgcgtcgcaccatttcagagggactcgcttgcactccggggatttca
tggttcgccgaagttgaggaacgcgaactcagtgattttgacagcatcgccacttgggtc
ggtgcacattggattgaacagttgcatggtaagagttttgcggttcgggtaaagcgcaaa
ggccaccatgactttaactcacagcaactggaaagatacctgggaggttatttattaaaa
cagacccagggcagtcgggtgcagctgaaggatgctgacgttgaaatcccgattcaaatc
accgataacattgtgcacttagtcggtaaacggcagcagggcttaggcggtttcccaatt
ccaacgcaggaaaccgtagtcagcctgatgagcggaggtttcgactccagtgttgccagc
tttgaatttatccggcgcggcgctcgtacccatttttgtttctttaatcttggcggcgac
gcgcacgaagtcgcagtaaggcaaatcagccattacctctggcaacgctatagctcttct
cacccgatcaaatttgtgagtattgattttgcgccggtagtcgaggatattctgacccac
tgcgataacggtcttatgggcgtggtattaaagcgacaaatgctaagagctgcagagcgg
gtagcccgttatctaaaagcgcaggcattggtgaccggagaggcgatcggccaggtgtcg
agccagacgttgtcaaacttacgggttattgatgccgcaacggatgcggtggtacttcgg
ccgctgattacccgtgataagcaagagatcgtcgatattgccaagcaaattggtaccgag
ccattggctaaatcgatcccggagtattgcggggtgatttctgttaagccgaccgtgcgg
gcgcctgtcgatgatgtgcatgcggaagaagctaagctggacatgagtttactgaagcgt
gttgtcgatgacgcacaggtattgagtatggccgatatcgccgcgcaggcagcagagaag
acagagctgcaaccgagtgcggttgaagagggcacggaacgggtgattatcgacatccgc
aatcaggacgaaattgatgagcagccgttatccgttgatctgcaggttaaggaaattccg
ttttttaaactgcagtcagaatttgtaaaacttgatgccagcacgcattacctgttgtat
tgttcgcagggcgtgatgagtaagatgcaggcgttgctgttgcaagagtctggtcatacc
aatgtttcggtctataaacctgagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system