KEGG   Iodobacter fluviatilis: C1H71_04035
Entry
C1H71_04035       CDS       T06803                                 
Name
(GenBank) ribonuclease II
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
ifl  Iodobacter fluviatilis
Brite
KEGG Orthology (KO) [BR:ifl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ifl03016]
    C1H71_04035
Enzymes [BR:ifl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     C1H71_04035
Transfer RNA biogenesis [BR:ifl03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    C1H71_04035
SSDB
Motif
Pfam: RNB
Other DBs
NCBI-ProteinID: QBC45637
UniProt: A0A7G3GDQ8
Position
complement(919439..921286)
AA seq 615 aa
MNVFFEEDGNFKVATIKEEQAASLMLEDTRGKRFKVKAANVLLRFERISLDDFLKAAQVA
ADEIDIDFLWECCGVEEFAFNDIAAEYFGANPSVQQQAAALIRLHAAPMYFYRKGRGHYK
AAPEENLKAALAGVEKKKKEAEQMAIWQAELQAGALPESFIPLASKLLHRPDKNTIEWKT
LAAAADAMQTSTLRLMEKIGAIPDVADYLLDGFLAESFPKGRGFAPTEPVTCPSDLPLAD
VRAFSIDDSTTTEIDDAFSLKRLPNGNWQVGIHIAAPALGIVAGSDVDKIILDRLSTVYM
PGDKITMLPNEVVEVFTLQEGRTCPALSMYLELSQGFDVLSHRSIVEMVPIAANLRHEQL
EPVFNENTAGKADAPDFPWKEEITFLWHFAGALEGRRGKADPTAPLKIDYSFYIDQVDGE
KRVRIVPRKRGAPMDKLVAELMILANSTWGKDLMQGQVAGIYRGQNGGRVRLTTQAGPHI
GLGVECYSWASSPLRRAVDYVNQLQLLALLGNTKPRFQKNDAELYSIIGSFDTAYAAYAE
LQDKMERYWCLRWLQQEKKREMTAVVIKENLVRVDGMPLVIRAGIPELPAGTTVSLQLMK
IDLLELLLETRMATI
NT seq 1848 nt   +upstreamnt  +downstreamnt
atgaatgttttttttgaggaagatggtaatttcaaggtagccacgatcaaggaagagcag
gctgctagcctgatgcttgaagatacccgtggtaaacgttttaaagtgaaggcggcgaat
gtgctgctgcgctttgagcggattagcttggatgactttctaaaagcggctcaggtcgcc
gcagatgaaattgatatcgattttctgtgggaatgttgtggtgtggaagagtttgcgttt
aatgatattgccgcagaatactttggtgctaacccatcggtgcagcagcaagcggcagcg
ttgattcgtttacacgcagcgcctatgtatttttaccgtaaggggcgtggccattataag
gctgcccctgaagaaaatctaaaggccgccttggccggggtcgaaaaaaagaaaaaagaa
gccgagcaaatggccatttggcaagccgagctgcaagctggcgctttgcccgagtcattt
attcctttggcgagcaaattactgcatcgcccagataaaaacaccattgaatggaaaaca
ctggctgccgctgcggacgctatgcaaacgtctaccttgcgtttgatggaaaaaattggc
gcgattcctgatgtggccgattatctactcgatggtttcctcgctgaatccttccctaag
ggccgtggttttgccccaaccgagccggtgacttgccctagcgatttaccgctggccgat
gtgcgtgcctttagtattgatgactctaccaccacagaaattgacgatgctttcagtctg
aagcgtctgcctaatggcaattggcaggtgggtatccatattgccgcgcctgctttgggg
attgtggcgggctcggatgtcgataaaattattctggatcgcctgtctaccgtgtatatg
ccaggcgataaaatcactatgttgcccaacgaagtggttgaggtgtttaccctgcaagaa
gggagaacctgccccgcgctaagcatgtatttagagttgtctcagggctttgatgtgctt
tcacatcgcagtatcgtagagatggtgccgattgctgccaacttacgtcatgaacagctt
gagccagtgtttaatgaaaacaccgcaggtaaagcggatgcgcccgatttcccttggaaa
gaagaaatcaccttcttatggcactttgccggtgcattagaaggccgccgtggtaaagct
gacccgactgcaccgctaaagatcgattacagtttttacattgatcaggtagacggcgaa
aaacgtgtgcggattgtgccgcgtaaacgtggcgcaccgatggataagctggtggccgag
ctgatgattctggccaatagtacttggggcaaggatttgatgcagggccaagtagcgggt
atttatcgcggtcaaaatggtgggcgtgtgcgcctcaccacgcaggcgggcccgcatatt
gggctgggtgtggagtgctactcttgggcgtcttcccctttacgccgcgctgtggattac
gtgaatcagctgcaacttttggctttgctgggcaataccaagccgcgtttccaaaagaac
gacgccgagttgtattcgattatcgggagttttgacactgcttatgcagcttacgccgaa
ttacaagataagatggaacgatactggtgtttgcgttggttgcagcaagagaaaaaacgc
gaaatgactgccgtggtcataaaagaaaacttggtgcgggtagatggcatgcctttagtg
attcgagcaggtataccggaactaccagcgggcacaacggtcagtctacaattgatgaaa
attgatttattagaactgctacttgaaacgcgtatggcaacgatttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

Download RDF
DBGET integrated database retrieval system