KEGG   Ignicoccus hospitalis: Igni_1419
Entry
Igni_1419         CDS       T00587                                 
Name
(GenBank) RNA modification enzyme, MiaB family
  KO
K15865  threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5]
Organism
iho  Ignicoccus hospitalis
Brite
KEGG Orthology (KO) [BR:iho00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:iho03016]
    Igni_1419
Enzymes [BR:iho01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.5  tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
     Igni_1419
Transfer RNA biogenesis [BR:iho03016]
 Eukaryotic type
  tRNA modification factors
   Methylthiotransferase
    Igni_1419
SSDB
Motif
Pfam: Radical_SAM UPF0004 TRAM TRAM_2
Other DBs
NCBI-ProteinID: ABU82595
UniProt: A8ACE3
Position
1277346..1278617
AA seq 423 aa
MKIYYETYGCAVMLGEAERVLEELKSKGYEVVGRPEEADASIIFTCTVRSETEQRMAWRI
KELCKASKKLIVTGCLASAQPGLVKMVCPRASIVSNSSLHEIELALKGEKKYLLKGQRPR
DWLKGVTPGGFRVVIPIADGCLGNCTFCITKVARPRLVSQRPDSIIEYALKGVKRGAKEI
WLTAPDVAAYGKEIGLELPDLLEKLLKVLPENVYVRVGMMSPDTFREVMDRTIDVMRDPR
VFKFFHLPLQSASDKVLRLMGRRYTYSEFVEIVNKVRKAFNDPTIATDVMVGFPGEEEDD
FELTLKALRELAFERVHLAAYTPRPLTLGARMPQVREDVKSRRVKRAMNVIEAVGVEVHK
RYVGGKFKAFVDEYDQKHGTFVARLWNYTPVVLREESSLGEEIVVKIEGATFYDLRGTVW
SVS
NT seq 1272 nt   +upstreamnt  +downstreamnt
atgaagatatactacgagacctacggctgcgcagtgatgctcggcgaagccgagagggtg
ctagaggagctgaagagcaaaggatacgaagttgtagggaggcccgaggaggcggacgcg
tccataatatttacttgcacagtgaggtcagaaaccgaacagaggatggcatggcgcata
aaggagctttgcaaggctagcaagaagttgatcgtgactggctgcctcgccagcgcccaa
ccgggactagtgaagatggtctgtcccagggcgtccatcgtctctaactcttcgttacac
gaaattgagcttgccttaaagggggagaagaagtacctactcaaggggcagaggcccagg
gactggctcaagggcgtaacgcccggcggctttagggtagtaatccccatcgccgacggc
tgcttgggcaattgtactttctgtataaccaaagtggccaggccgcggcttgtaagccaa
aggccagactccataatcgaatacgcgctcaagggcgtcaagaggggcgccaaggagatc
tggttgacggcgccggacgtagcggcctacggcaaggagatcggtttagaattgccagat
ctgttagagaaattgttgaaagtcttgccggaaaatgtatacgtcagggtaggcatgatg
agtccagacacctttcgcgaggtaatggatagaactatagacgtcatgagggatccaaga
gtcttcaagttctttcacttaccgctccagagcgccagcgacaaggtgttgaggttaatg
ggaaggaggtatacgtactcggagtttgtagagatagtcaacaaggtgagaaaggccttc
aacgaccccactatagccactgacgtcatggtcggcttccccggcgaggaagaggacgat
ttcgagttgacgcttaaggcgttgagggagttggccttcgagagggttcacctagccgcc
tatactccgaggcccctaaccttgggggcccggatgccccaagtaagggaggacgttaag
tccaggcgcgttaagagggccatgaacgtgatagaggccgtaggcgttgaggttcacaag
aggtacgtcggcgggaagtttaaggcatttgtggacgagtacgaccagaagcacgggacc
tttgtggcgaggctctggaactacacgccggtggtcctaagggaggagagctccttaggg
gaagagatagtagttaaaattgaaggcgccacgttctacgacctaaggggtaccgtttgg
tcagtaagctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system