KEGG   Ipomoea nil (Japanese morning glory): 109153290
Entry
109153290         CDS       T04663                                 
Name
(RefSeq) transcription initiation factor IIF subunit beta-like
  KO
K03139  transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    109153290
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ini03021]
    109153290
Transcription machinery [BR:ini03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIF
     109153290
SSDB
Motif
Pfam: TFIIF_beta TFIIF_beta_N Tau95
Other DBs
NCBI-GeneID: 109153290
NCBI-ProteinID: XP_019156718
Position
Un
AA seq 295 aa
MVHFSLSISTSPSSKLEQSKELEKKKSNDQTTQLKKKKWKKTMAASATPPPPWTPARLMK
CPLVVSKSWQSQAAASSSADTPLVGKVVVSLDPLKPEESLQFSMEMAGNEARNIPKGYSL
NMFKDFVPMCIFSESNQAKVAMEGRIEHKFDMKPHTRNMEEYRKMCRERTNKSMVKNRQI
QIIDNDRGVHMRSMPGMLGLIASSSKEKKKAAPVKGPEVKRTRRDRGELEDIMFKLFERQ
PNWTLKQLVQETDQPAQFLKEILNELCVYNKRGANQGTYELKPEYKTSAEDTGAD
NT seq 888 nt   +upstreamnt  +downstreamnt
atggtccatttcagtctttcaatttcaacatctccatcgtcaaaattggaacaaagcaaa
gaattggaaaagaaaaaatcaaacgatcagacaacacagttgaagaagaagaaatggaag
aagacgatggcagcgtcagcgacaccgccgccgccgtggacaccggcaaggctgatgaag
tgtcctctagtcgtctccaagtcgtggcagtctcaggcggcggcctcctcctccgcagat
actcctctagtgggtaaagtcgtcgtttctctcgaccctcttaagcccgaagaatctctc
caattttcaatggaaatggctggaaatgaagctcgaaacattcctaaaggctactcgttg
aatatgttcaaagattttgtgccaatgtgtattttctcagagtcaaatcaagcaaaggtt
gccatggaagggagaatcgaacataaatttgacatgaagcctcacactaggaatatggag
gaatacagaaaaatgtgtcgtgaaagaacgaataagtcgatggttaagaatagacagata
cagataattgataatgatcgtggtgtgcacatgagatcgatgcctggaatgttgggcttg
attgcatcttcctctaaggagaagaagaaagcagctccagttaagggacccgaagtcaaa
agaactagacgggaccgtggagagttggaggatatcatgtttaagcttttcgaaagacaa
cctaattggaccctgaagcagctagtccaagaaacagatcagcccgcacaatttttgaag
gagatactaaacgagctgtgtgtatacaacaagcggggagcgaaccaaggcacttacgag
ctgaaacccgagtataagacatccgcagaggatacgggtgctgactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (3)   
   Pfam (3)   
All databases (33)   

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