KEGG   Ipomoea nil (Japanese morning glory): 109153792
Entry
109153792         CDS       T04663                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 5
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    109153792
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ini03021]
    109153792
   03036 Chromosome and associated proteins [BR:ini03036]
    109153792
Transcription machinery [BR:ini03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     109153792
   Coactivators
    SAGA/TFTC/STAGA complex
     109153792
Chromosome and associated proteins [BR:ini03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     109153792
    STAGA complex
     109153792
    TFTC complex
     109153792
    SAGA complex
     109153792
    SLIK complex
     109153792
SSDB
Motif
Pfam: WD40 TFIID_NTD2 ANAPC4_WD40 NBCH_WD40 Nbas_N Nup160 RAB3GAP2_N WD40_like LisH PALB2_WD40 Cytochrom_D1
Other DBs
NCBI-GeneID: 109153792
NCBI-ProteinID: XP_019157197
Position
Un
AA seq 681 aa
MDEDDIEKAVIAYLKKKGFKQTELAFQEEHQKQSKNINNSSSLSNTNSSASSHTDPDIAK
QILSFSQSENVPAKYHEGYSKLRSWADSSLDLYKHELLRVLYPVFLHCFMDLVAKGHIQE
ARAFFNSFREDHEMMHLRDLQKLEAVLSPSHLEEMEFAHFLRQSKVNIKMCQYSYDLLLQ
YLHKAQAIVMLGIINEHINFQVSPGQPSSVSDDAEVVTLIGSGQEAASLINQKEIHWGLL
EDSIEERFEKAGGLLSDSEKVEGESKEGEAEENKIKSVEGGKQGPSLKKLKKDKVGGPTG
KVSHVEGGTTSAAPHVKPELPLPAIPMEVEHSILEDLRNRVQLSSMALPSVNMYTFLNTQ
NGLNCASISHDGSLVAAGFSDSSLKLWDMTKLGQQPGNASLQGDIDSPPSEQVLGTNGQR
RCYTLFHGHCGPVYSASFSPYGDFLLSSSSDSTIRLWSTKLNANLVCYKGHNYPVWDVQF
SPVGHYFASASHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHANCNYIATGSSDKTVRL
WDVQSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGKIMVWDLASGRCITPLVGHASC
VWTLAFSCEGSLLASGSADCTVKLWDVTTSTKMPKSEENKSGSTNRLRSLKTLPTKSTPL
YALRFSRRNLLFAAGAFSKSA
NT seq 2046 nt   +upstreamnt  +downstreamnt
atggatgaagacgacattgagaaagcggtgatagcgtatctgaaaaagaagggtttcaag
caaacggagcttgctttccaggaggagcatcagaaacagagcaaaaacatcaacaactct
tcctctctatccaacacgaactcctcagccagttctcacactgacccagatattgccaag
caaattctctctttctcacagtctgaaaacgttcctgcaaagtatcatgaggggtacagc
aagcttcgatcttgggcagatagttctctcgatttgtataagcatgaattgcttcgtgtc
ttgtaccctgtatttctccactgtttcatggatcttgtggctaaaggtcatattcaggaa
gcccgagcctttttcaatagcttccgggaagaccatgagatgatgcacttacgtgatctc
cagaaactagaagctgttctgtcaccatcacatctagaggaaatggaatttgcacatttt
ttacggcaaagcaaagtgaacataaaaatgtgccagtattcctatgaccttttgctgcaa
tacttgcacaaggcacaggccattgtgatgcttgggattatcaatgagcatataaacttt
caagtttctcctggacagccaagttcagtttcagatgatgctgaagttgtaactcttatt
gggagtggccaagaagctgctagtttaataaatcagaaagaaattcattggggattgctt
gaagattccatagaagagcggtttgagaaggcaggaggtctgctttcagattcagagaag
gttgaaggagaatctaaagaaggagaagcagaagaaaacaagataaaatcagttgaagga
ggaaagcaaggcccttctctgaaaaagctgaaaaaggacaaggttggaggtcctacaggg
aaagtttctcacgtagaggggggcacaacatctgctgcaccacatgttaaaccagagtta
cctttgccagcaatacccatggaggtagaacactctattcttgaagacttgaggaaccgt
gtgcagctgagtagcatggcattgccatctgtgaacatgtatacctttctcaatactcaa
aatggactaaactgtgcatcaatatctcatgatggatcactggtggctgctgggttctcg
gattcttcattaaagttgtgggatatgacaaagcttggacaacaacctgggaatgcttcc
ttgcagggtgatattgattcccctccaagtgagcaggtgcttggcacaaatggacaacga
agatgttatacattatttcatggtcattgtggacctgtttattctgcatccttcagtcct
tatggtgattttctcctatcgtcatcatcagattcaaccattcggttatggagcacgaag
ttaaatgcaaatcttgtttgctataagggccataattatcctgtatgggatgttcagttt
agtcctgttgggcattactttgccagtgcttcacatgatcgaacagcaaggatctggtca
atggacagaatacagcctctgaggataatggctggtcacttatctgatgttgattgtgtg
caatggcatgcaaactgcaactacattgcaactggatcaagtgacaaaactgttcggttg
tgggatgtccagagtggcgagtgtgtcagaattttcattggccataggagtatgatattg
tcgttggcgatgtcacctgatggtcgttatatggcatcaggtgatgaagatggaaaaatc
atggtgtgggatcttgcaagtggtcgttgtattacccctttggttggtcacgcctcttgc
gtatggacacttgctttcagctgtgaaggttctcttcttgcatctggttctgctgattgc
actgtgaaattatgggatgtaaccacgagtactaagatgccaaaatctgaagagaataaa
tctggaagtaccaataggcttcgatcattgaagactctccctactaaatccactccatta
tatgctttgcggttttctcgaagaaatcttctctttgctgctggcgctttctcaaaaagt
gcataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (48)   

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