KEGG   Ipomoea nil (Japanese morning glory): 109165105
Entry
109165105         CDS       T04663                                 
Name
(RefSeq) endonuclease MutS2
  KO
K07456  DNA mismatch repair protein MutS2
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    109165105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ini03400]
    109165105
DNA repair and recombination proteins [BR:ini03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     109165105
SSDB
Motif
Pfam: MutS_V Smr MSSS AAA_22 HsbA Cwf_Cwc_15 FAM184
Other DBs
NCBI-GeneID: 109165105
NCBI-ProteinID: XP_019169269
Position
Un
AA seq 938 aa
MKLSCCSLITFNATPPRRTLFSLRPPRFSVSLSGESTHSHRVSLAESLQSETLQVLEWPA
VCSQLAAFTSTSMGLSAAQSATIPLGRSPEESRRLLAQTSAAVAVPRPLDFSGIEDVSRI
VDTAVAGQMLSIREICAVKRTLIAARSLLKQLEEISFQSELCERWSPLIEILQNCDFLVE
LAHHIEFCIDCDLSVILDRASEELEIVRFERKRNMENLELMLKQASSRIFRAGGIDRPLV
TKRRSRMCVGVRASHRSLLPNGVVLNVSSTGSTYFMEPEEAVELNNMEVKLSSEERNEER
AILSSLTSEIALSKMKIECLLDRMLEMDLAFARAAHAHWMNGVCPALSSENFDDPIFNDL
SVDIEGIQHPLLLECSLRRLPDIVRFKSRSSLYSDQKNDATDFESVTRASAFPVPIDIKI
EHGTRVVVISGPNTGGKTASMKTLGLASVMSKAGMYLPAQNKPRLPWFDLILADIGDNQS
VEQNLSTFSGHMLRLCKILEAASESSLILVDEIGSGTDPSEGVALATSILQYIKERVNLA
VVTTHYGDLTRLKEKDNRFCNAAMEFSLDTLQPTFRILWGSTGESNALMIAKSIGVNESI
ISRAQSWVNKLTPDKMQEQKGLLYQSLVEERDRLETQAKKAASLHSNIMNLFQEIQDEAQ
DLDEREKALKAKETQKIQQEVRAVKREIEAVLKDFENQLKTIDILQVNSLIKKSESAISS
IIEAHQPSKELVRETGQSFYTPRVGEQVLVKSLGNKLATIVEETGDDETVLVQYGKIRVR
VDKSNIRALPTNSATGSVPSSRTQGQGIKNLKELRSLTTTASNINQDPYGPVVQTSKNSV
DLRGMRAEEASHHLSMGIDARPPNSVLFVVHGMGTGVIKELALKLLRDHPRVVKFEQESP
FNYGCTVAYIKRRSTINILPSLRIPNFSPSGSFDATGI
NT seq 2817 nt   +upstreamnt  +downstreamnt
atgaaactcagctgttgcagcctcatcacctttaatgctaccccgcctcgccgcacactc
ttctccctccgtccgccgcgattctccgtctccctctccggcgagtcaactcactctcac
agggtctcgctagccgaatcgctccaatccgagacgctccaagtcctcgaatggcccgcc
gtctgctcccagctcgcagccttcacttccacttccatgggcctctccgcggcccagtcc
gcgacgattccattgggcaggagcccggaggagagccggaggctcctggcgcagacctcc
gctgccgtcgcggttcctcggccgttggatttctccggcatcgaggacgtctcgcgcatc
gtcgataccgccgtcgccggtcaaatgctctccattcgtgagatttgtgccgtgaaacga
actcttatcgcagctcggtcgttgctcaaacagctggaggagatctcttttcagagtgaa
ctttgtgaaaggtggtctccgctgattgaaattctccagaattgtgattttcttgttgaa
ttggcacaccatatagaattctgtatagattgtgacctttcagtaatactagatagagct
agtgaagaactggaaattgtgaggtttgaaagaaagaggaacatggaaaatcttgaacta
atgttgaaacaagcatcatctcgaatttttcgggctggtgggattgatagaccgctagta
accaaacgccgttcaaggatgtgtgttggtgttagagcttcccatagatctttgcttccc
aatggtgtagtcttaaatgttagcagcactggatcaacatactttatggaacctgaagag
gcagttgaactgaataacatggaagtgaagctttctagtgaagagaggaatgaggaacgg
gcgattttgagttcgcttacgtctgaaattgctctatccaaaatgaagatcgagtgttta
ttagataggatgttagaaatggaccttgcatttgctagagctgctcatgctcattggatg
aatggggtctgtccagctcttagttcagagaactttgatgacccaatattcaatgattta
tctgtagatattgaaggtatacagcatcctctgctcctcgagtgctcgttgagaagattg
cctgatattgtaagatttaaatcccgaagttcactttattcggatcagaagaatgatgcc
acagattttgaatcagttactcgtgcatctgcttttcctgtaccgattgatataaaaatt
gagcatggaacaagagtggttgtgatctcggggcctaatacaggaggtaaaactgcttca
atgaaaacattaggtctggcttctgttatgtccaaggctggcatgtacttgccagctcaa
aataagcccagacttccttggtttgatctaattctggcagatataggagataatcagtct
gtagaacaaaacctctccacctttagtgggcacatgttacggctttgcaagatcttggaa
gctgcttcagaaagttctctaattcttgttgatgaaattggcagtggtactgatccttcg
gaaggcgtagctcttgcaacgagcattttacaatatatcaaggagagagttaatttagca
gttgtgaccacccactacggtgatttaacacgtttgaaagagaaggataatcggttttgt
aatgcagcaatggaattttctttggatacgctgcagcctacgtttaggattctttggggg
agcacgggtgagtcaaatgccttaatgattgctaaatcaattggtgttaatgaaagcatc
attagtcgggcgcaatcatgggtaaacaaattgacaccagacaagatgcaggagcagaaa
ggtttactgtatcagtcactagtggaagaaagagacagattagaaactcaagcaaagaaa
gctgcttctcttcattcaaatatcatgaatcttttccaagagattcaagatgaggcgcaa
gatctagatgaacgcgaaaaagctctgaaggcaaaggaaactcagaaaatccaacaagaa
gtgagggctgtgaagagggagatagaagctgtactgaaggactttgagaaccaactcaag
actattgacattcttcaggttaattcacttatcaagaaatcagagtctgcaatctcatcc
ataatcgaagctcatcagccttcgaaagaacttgtcagagaaacaggccaaagtttttat
accccaagggtaggcgagcaagttcttgtgaagagtttaggaaataagctggctaccatc
gttgaagaaactggggacgacgaaactgtccttgtccaatatggaaaaattagagtccgt
gtggataaaagcaatataagagcccttccaactaattctgcaacaggttctgtcccgagt
tcaagaacacagggtcaggggatcaagaacctcaaggaactaagaagcctcactactaca
gccagcaacataaaccaagacccttatggtccagttgttcagacatctaaaaactcagtt
gatttgcgtggcatgcgagcagaggaagcttctcatcacctcagcatgggcatagatgca
aggccacctaattctgttcttttcgtcgttcatgggatgggcactggcgtcataaaggag
ttggcactaaagctgctgagagatcatccccgcgttgtcaagtttgagcaggaaagtcca
ttcaattacggttgtacagttgcttatatcaagcgtcgatcaaccatcaacatccttccg
tccctccgcattcccaatttttctccatctggttcttttgatgcaactggcatttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (30)   

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