KEGG   Ipomoea nil (Japanese morning glory): 109175963
Entry
109175963         CDS       T04663                                 
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit, cytoplasmic
  KO
K01890  phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    109175963
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ini01007]
    109175963
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ini03016]
    109175963
Enzymes [BR:ini01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.20  phenylalanine---tRNA ligase
     109175963
Amino acid related enzymes [BR:ini01007]
 Aminoacyl-tRNA synthetase
  Class II (U)
   109175963
Transfer RNA biogenesis [BR:ini03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    109175963
 Prokaryotic type
    109175963
SSDB
Motif
Pfam: tRNA_synthFbeta PhetRS_B1 B5 B3_4 tRNA-synt_2d EAD7
Other DBs
NCBI-GeneID: 109175963
NCBI-ProteinID: XP_019180889
Position
Un
AA seq 593 aa
MPTVSVGRDRLFEALGRTYTEEEFEELCFKFGIELDDVTTEKAIKRKEQHLEDEETSEDE
EIIYKIDIPANRYDLLCLEGLVQALRIFNGLDPIPTYKVANISEESMLKMHVKPETSKIR
QFVVCAVLRGVTFDEARYNSFIDLQDRLHQNICRRRTLVAIGTHDLDTIQSPFTYEALPP
SEINFVPLKQKESFRADKLMEYYREHDLKLKKFLHIIENSPVFPVIYDRNRTLLSLPPII
NGAHSAIKLNTRNVFIECTATDLTKANIVLNTMVTMFSAYCERKFEVEPVKVIYPDGKSH
ICPDLSVYEMDVSLSYINSVVGASLAENQVADLLHKMQLHAKKSVSKDEQVKFIVSVPPT
RSDVLHACDVAEDVAIAFGYNEIPKRKLASLKPLPLSQLSDLIRMEVAMAGYTEVLTWIL
CSKKEIASLLKHGEDNSAVVIADSRTSEFEVVRTRLMPGILKTVGHNKDHPKPIKIFEVG
DVVFLDNTKDVGAINRRHLAALYCGANSGFELIHGLVDRIMEVTATPFVTPGNTSGYYIE
SSDEPELLQGRQARVICRGKHIGNFGIVHPEVLANFDIPDPCSFVELDLEKLL
NT seq 1782 nt   +upstreamnt  +downstreamnt
atgcccaccgttagcgttggaagagatcggctctttgaagctctcggtcgcacttacacc
gaagaagaatttgaagaattgtgcttcaagtttggaattgagctcgatgatgtcacgaca
gagaaggcaattaaacggaaagaacagcatttggaggacgaagaaacatctgaagatgag
gaaattatatacaagattgatattcccgctaacaggtatgatttactttgcctcgagggg
ctagttcaagcccttcgcatttttaatgggcttgatccaatacctacatataaggttgca
aatatcagtgaagaatccatgctgaaaatgcacgtcaagcctgagacttcaaagatccga
cagtttgttgtctgtgctgttttaagaggtgtaacttttgatgaagcaagatataatagc
tttattgatctacaagatcgacttcatcagaacatttgccggcgaagaaccttggttgct
attggaactcatgacttggatacaatacaatcccctttcacatatgaggctttgcctccc
tcagaaatcaactttgttccgttgaaacagaaagaaagtttcagagctgataagctgatg
gaatattacagagagcatgatctgaaactgaagaagttcttacacataattgagaattca
ccagtgtttcctgttatatatgaccgtaacagaactttattgtctttgcctcctattatt
aatggtgcacattctgccattaaattaaatacaaggaatgtgttcattgaatgcacagcc
acagatttgacaaaggccaatattgttttgaacacaatggtgactatgttttcagcttac
tgtgaaaggaagtttgaagttgaaccagttaaagtaatatatcctgatggaaaatcacac
atttgtcctgacctttcagtctacgaaatggatgtatctttgtcatacattaacagcgta
gttggagcctccttggccgaaaatcaagtggcagatttattgcataaaatgcaactgcat
gctaagaaatctgtttctaaagatgagcaagtcaagtttattgtgtctgttcctcccact
agaagtgatgttcttcatgcttgtgatgtggctgaggatgttgcaattgcttttggctac
aatgaaattccaaaacgaaagcttgcatcgttgaagcccctcccacttagtcaattaagt
gatctgattcgaatggaggttgcaatggcaggttacacagaggtgttgacatggatattg
tgttctaaaaaagaaattgcctccctgctgaagcatggagaagataattcggcagttgta
attgccgattctcgtacttctgagtttgaggttgtgcggacacgtctaatgccaggcata
ttgaaaactgttggacacaataaagaccatccgaaacctataaagatatttgaagtaggg
gatgtagtcttcttggacaacactaaggatgttggtgcaattaatcgtcgtcaccttgct
gctctgtattgcggtgccaactcaggatttgagctaatacatggtctagttgatagaata
atggaagtgactgcaactccatttgtaacacctggcaatacttcaggctactacatagaa
agttcagatgagcctgagcttcttcaaggaagacaagcaagagtcatttgcagaggaaag
cacattggtaactttggcattgtgcaccccgaggtccttgcaaacttcgacattccagac
ccttgttcgtttgttgagctcgacttggagaagctcttatag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (36)   

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