KEGG   Ipomoea nil (Japanese morning glory): 109177668
Entry
109177668         CDS       T04663                                 
Name
(RefSeq) small RNA degrading nuclease 3-like
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    109177668
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ini03009]
    109177668
Ribosome biogenesis [BR:ini03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    109177668
SSDB
Motif
Pfam: Bap31_Bap29_C Dynamitin BRAP2 HIP1_clath_bdg
Other DBs
NCBI-GeneID: 109177668
NCBI-ProteinID: XP_019182637
Position
Un
AA seq 519 aa
MDEMIASAKKDVLVEIVKLAQKRGMEGSKGGWKDFLKFFDKKFGSSLSDPAKRSTDVLAA
FLKTFNQKEDLKIFEKVLQCHFNRDAVVEFQKSSADTESPEQRLVRLTLENPQYPVDYSF
PSHEEGWLNTKRSKKSKVMQSTEMLAVDCEMALCHDGTEALIRVCAVDRNLKVKLDEFVK
PSKAIADYRSDITGITATDLDGVTCSLADVQKSLKKLLSHGKILVGHSLYNDLRALQIDH
PRVIDTAYVFKYRDEPPNRKPSLSNLCKFVLGFELRKKGSPHNCLDDACAAMKLVIQKVE
HDVDDVVPFVREKVQEEVQMAKLLVHRVPVVVSSDDLHKVISGEFTVEVKTNKKPRGDRY
SAFAIFENQQAANEAFEKIEGILEKDTSGRPQKLVSFQLDTGVSGSLCVCKMARDDSCKS
NNASTKRPLQDEEPLGESKKSRTDYQGEELEKNNITATSDQSETYLKEIERLKRELSQRD
QEISNLKEIERLKRELSQRDQEIANLNKIVVALTRKQGL
NT seq 1560 nt   +upstreamnt  +downstreamnt
atggatgagatgattgcctctgcgaaaaaagatgtacttgttgaaattgtgaagttagcc
caaaaacgtggaatggaaggtagcaaaggaggctggaaggactttttgaaattttttgac
aagaagtttggatctagcttgagtgaccctgccaagaggtctactgatgtcttagctgca
tttttaaaaacatttaatcaaaaggaggatttgaagatatttgagaaggtattacaatgt
catttcaatcgtgatgctgtggttgaattccaaaaaagttcagcagacactgaatcccct
gaacagaggctagttcgcttaactcttgaaaaccctcaatatccagttgattattccttc
ccgtcacatgaggagggctggctaaataccaaacgcagtaaaaagtccaaggttatgcaa
tcaactgaaatgcttgcagttgactgtgagatggctctttgtcatgatggcactgaagct
ttaatcagggtctgtgctgttgatcggaatttaaaggttaaacttgatgaatttgtaaag
cccagtaaagcaattgcagattacagatctgatattacaggaattactgcaacagattta
gatggagttacttgttccttggctgatgtacagaaatctttaaagaagttgttatctcac
ggaaagatattagttggccacagcttatacaatgaccttcgagctttacagatagatcat
ccaagagtcattgacacggcttatgtcttcaaataccgggatgagcctcctaacagaaaa
ccttcgctaagtaacttatgtaaatttgtgttaggttttgaacttcggaagaagggatct
ccacataattgcttggatgatgcatgtgctgcaatgaagcttgttattcaaaaagttgag
catgatgttgatgatgttgtacctttcgtccgtgaaaaggtccaagaggaggtacagatg
gcaaaacttcttgtccacagggtaccagtggttgtttctagtgatgatttacataaagtg
atttctggagagttcactgttgaagttaagactaataaaaaacctcgaggagatcggtat
tctgcatttgcaatttttgaaaatcagcaagcggcaaatgaggcatttgaaaagattgaa
ggtatcctagaaaaggatacatctgggcggccccagaaactcgtatcatttcaacttgac
actggagtatctgggagtttatgtgtttgcaagatggcccgtgatgattcttgtaaaagt
aacaatgcatctactaaacggccacttcaagatgaggagcccttgggtgaatccaagaaa
tccaggacagattatcaaggcgaagagctagagaagaacaatattactgccacaagtgat
cagtctgaaacctacttgaaggagattgaacggctgaagcgagaactaagccaaagagat
caagaaatctccaacttaaaggagattgaacggctgaagcgagagctaagccaaagagat
caagaaatcgccaacttaaataaaatcgttgttgcgcttacgaggaaacagggactttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

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