KEGG   Ipomoea nil (Japanese morning glory): 109178184
Entry
109178184         CDS       T04663                                 
Name
(RefSeq) cell differentiation protein RCD1 homolog
  KO
K12606  CCR4-NOT transcription complex subunit 9
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109178184
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ini03019]
    109178184
Messenger RNA biogenesis [BR:ini03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     109178184
SSDB
Motif
Pfam: Rcd1 DUF2249
Other DBs
NCBI-GeneID: 109178184
NCBI-ProteinID: XP_019183312
Position
Un
AA seq 323 aa
MANLPQSLSINAAAFGGGPASASSSSAAVGPQPNKDRKMQSAEQLVLDLSNPDLRENALL
ELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCV
ASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDSDVINFLLS
TEIIPLCLRTMEMGSELSKTVATFIVQKILLDDMGLDYICTTAERFFAVGRVLGNMVTAL
AEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDLLRDATAFSSCLREDPTTRRWLQQL
LHNVQIPRVPLQAGGGFDHMMVN
NT seq 972 nt   +upstreamnt  +downstreamnt
atggctaatctccctcagagtctctcgattaacgccgccgccttcggtggaggtcctgcc
tctgcctcctcctcctccgccgcagtcggacctcagcccaacaaagaccgtaaaatgcaa
tccgctgagcagcttgtgctagatcttagcaatcctgatctccgtgaaaacgctcttctt
gaactctccaagaagagagaattatttcaagatctggccccattactatggaattcgttt
ggtactattgccgcactgttgcaggaaattgtctccatctaccctgttttgtcaccacca
aacctgactccagcacaatcaaatagagtttgtaatgcacttgctcttcttcagtgtgtg
gcctctcacccagacaccagaatgctatttcttaatgcccatattcctctctatttgtat
ccttttcttaatacaacaagcaaatcaagacctttcgaatatcttaggcttactagctta
ggtgtcattggtgcccttgtgaaggtggatgacagtgatgttatcaattttctcctgtcc
acagaaataattcccctgtgcctgcgcacaatggagatggggagtgaactgtcaaaaaca
gttgcgacattcattgtgcaaaagatccttctagatgatatgggccttgattatatatgt
accacagcggagcggttctttgccgtaggccgggtgctgggaaatatggtgactgccctt
gctgagcagccttcatctagattgctgaagcatataattcgttgctaccttcgattgtct
gataatccaagagcttgtgatgcacttagaagttgtctaccagatctgcttagggatgcc
actgccttcagtagctgtcttcgagaggacccgactactcggaggtggctacaacagtta
cttcacaacgtgcaaattccaagagttcccctacaagcagggggaggatttgatcatatg
atggtgaactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

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