KEGG   Iodobacter ciconiae: EJO50_03240
Entry
EJO50_03240       CDS       T05767                                 
Name
(GenBank) exodeoxyribonuclease VII large subunit
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
iod  Iodobacter ciconiae
Pathway
iod03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:iod00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    EJO50_03240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:iod03400]
    EJO50_03240
Enzymes [BR:iod01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     EJO50_03240
DNA repair and recombination proteins [BR:iod03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     EJO50_03240
SSDB
Motif
Pfam: Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon RecJ_OB DUF745
Other DBs
NCBI-ProteinID: AZN35586
UniProt: A0A3S8ZQ39
Position
complement(728918..730273)
AA seq 451 aa
MSLSSTNSVILTVTELNRRAKTLLESSFPLLWVAGEISNFKRYDSGHCYFSLKDGNAQVR
CVMFRNKAALINFQPREGMQLEARALVSLYEARGDFQLTIEALRPAGLGALFAAYEKLKQ
KLESEGLFASEHKKTLPVFPQAVGIITSPAAAALSDVIAALKRRMPGLPIILYPCPVQGL
DAAPQIASAIKKASTRKEVDVLILCRGGGSLEDLWAFNEEVVARAIATCTIPIVSGVGHE
TDFSIADFVADVRAATPTAAAELVSPNRSEWQTKLARQQSLLHRAAERQLQSKMQSLDVL
SRRLQHPGERLRQQKSHLQALSHRLHLAPIRVLEKNNYRLKQLSQSLNHLKPSPERQQAH
LQRLSHQFLQAMPRLLEQRKQKLAMLAARLEPWNPQTVLARGYALVSRPDGQLVRHGAQL
SHGEPLSLQFVDSAVDVRVTKDLGTQGTLEI
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgagtttgtcaagtacaaatagcgtcattttaaccgtcacagaactcaaccgccgcgcc
aaaactctactggaaagtagttttcctttgttgtgggtggcaggtgaaatttcaaacttc
aaacgctatgactctgggcattgttacttcagcttaaaagatggaaatgcccaggtaaga
tgcgtgatgtttagaaacaaagctgccttaatcaatttccagcctcgtgaagggatgcaa
cttgaagcacgtgcgctggtttccctatatgaggcacggggtgacttccaactgaccatt
gaagcactacgaccagcagggctgggcgcactttttgccgcctacgaaaaactcaaacaa
aaactggaaagtgagggtttatttgcaagcgagcataaaaaaacactccccgtttttccg
caagcagtgggtattatcacctcccccgccgccgccgcactttctgatgtaatcgcagca
ctaaagcgccgtatgcccggcctgcccatcatcctttatccctgccccgtgcaagggctg
gacgccgcaccacaaattgccagtgccatcaaaaaagcaagcacgcgaaaagaagtcgat
gttcttatcctgtgccgcggaggcggaagcctggaagatttatgggctttcaatgaagaa
gttgttgcccgtgcaattgcaacctgcacaattcccatcgtaagtggtgtaggccatgaa
accgactttagcattgccgattttgttgctgacgtacgggctgccacccccactgcagca
gcagaattggtcagccccaaccgtagcgaatggcaaaccaaacttgcgcgccagcaaagc
cttttgcatcgggccgctgagcgccagctacaaagcaagatgcaaagcctggacgtccta
tcaagacgtttacaacatcccggagaacgcttacgccagcaaaaaagtcacttgcaagcg
ctaagccatcgcttacatctggcaccgattcgggtactggaaaaaaacaattaccgcctt
aagcagctctcacaaagcctgaatcatctaaaaccaagccccgaacgccagcaagcacac
ttgcaacgcctatcccatcagtttttgcaggccatgccccggctgctggaacaacgcaaa
caaaaactggccatgctggcagcccggcttgagccatggaacccgcaaaccgtattagcc
cgcggttacgcgcttgtaagccgccctgatggccagcttgtccgccacggggcacagctc
agccatggcgaaccgctatcactgcaatttgtagatagcgccgtcgacgttcgcgtaact
aaagacttgggtacacagggaacgctagaaatttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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