KEGG   Iodobacter ciconiae: EJO50_15080
Entry
EJO50_15080       CDS       T05767                                 
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
iod  Iodobacter ciconiae
Pathway
iod00300  Lysine biosynthesis
iod00550  Peptidoglycan biosynthesis
iod01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:iod00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    EJO50_15080
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    EJO50_15080
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:iod01011]
    EJO50_15080
Enzymes [BR:iod01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     EJO50_15080
Peptidoglycan biosynthesis and degradation proteins [BR:iod01011]
 Precursor biosynthesis
  Amino acid ligase
   EJO50_15080
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase AAA_26
Other DBs
NCBI-ProteinID: AZN37671
UniProt: A0A3S8ZW14
Position
complement(3421322..3422803)
AA seq 493 aa
MKAVSWNLPTLDLPAIDAIAAGARLVADSRSVQAGDVFLAFQGEYTDGRSYISDAIAAGA
AAVLWEAEDFVWNPAWKTPNLAIPQLRAQAGIVAAHLLGNPSQSLFVTGITGTNGKTSIA
NWLAQAFNLLGHKTGVLGTLGNGFIDRLESSTHTTLDPVTLQGWLARLQNEGASHIAMEV
SSHGLDQGRVHGTHFDAAVFTNLTRDHLDYHGDMASYAAAKAQLFNWEDLKTAVINTDDA
FGRELASQCKAPRVLTYGLENGGIRASRINLTLTGLELEVATPYGLCNISSPMLGRFNAS
NLLACLCVLLAADVPLAKAANVLSQIQPAAGRMQKLGGDDRPLIVVDYAHTPDALEKALA
TLRESMPEKSRLYCIFGCGGDRDKGKRPLMGEIACRLADAVIITSDNPRSETPQAIIQDV
VRGVSGVPGSGHANYSIDSDRSSAINDAIDVATSKDVVLIAGKGHETYQEIAGIRHPFDD
VAIANRALARKKK
NT seq 1482 nt   +upstreamnt  +downstreamnt
atgaaagctgtgagctggaacctccctactctcgaccttcctgcgatcgatgccatcgct
gcgggcgcgcgtctcgttgccgatagccgcagcgttcaggcaggggacgtattcttagcc
ttccagggcgagtacaccgatggccgcagctatatctccgatgcgattgcggcaggcgca
gcagccgtactgtgggaagcagaagactttgtatggaatccagcctggaaaacccccaat
ctggctatcccgcaactgcgcgctcaagccgggattgttgcggcacatttattgggtaat
ccatcccagtctctgtttgtaaccggcattaccggtaccaacggcaaaacatctatcgcc
aactggctggcgcaagcctttaatctgcttgggcataaaacaggcgtactcggaacgctg
ggcaatggttttattgatcgactggaaagctcgacccacaccacgcttgacccggtaact
ttgcaaggctggctggcccgcctgcaaaacgaaggtgccagccatattgcaatggaagtc
tcgtcacatggtctggatcagggccgcgtgcatggcacccattttgatgctgctgtattt
accaaccttacccgtgatcacctggattaccacggagatatggctagctatgcagcagca
aaagcacagttatttaattgggaagacctaaaaacagccgttattaatacagatgatgcc
tttggccgcgagctagcctcccaatgcaaagcaccccgtgtgctgacctatggcctggaa
aacggcggcattcgtgccagcagaatcaatctaacactgacaggcctggagctggaagtt
gccacgccctatggtctgtgcaatatcagctccccgatgctgggccgctttaacgccagc
aatctgcttgcatgcctgtgcgttttactcgctgccgatgtgccactggccaaagctgcc
aatgtgctcagccagattcagcccgctgcaggccgtatgcaaaaactgggcggtgatgat
cgtcccttgattgtggttgattacgcgcacacgccagatgctctggaaaaagcactggcc
acgctgcgtgaatccatgccggaaaaaagccgtttgtactgcatctttggctgtggtggc
gacagggataaaggcaaacggccactcatgggcgaaatcgcctgccgtcttgccgacgca
gtgatcatcacctcagataatccgcgcagtgaaaccccgcaagccatcatccaggatgtt
gtacgaggcgtttctggagtccctggcagcggtcacgccaattacagtattgattcggac
cgctcctctgccattaatgatgcaattgatgtcgccacaagcaaagacgttgtgctgatt
gcaggcaaaggccacgaaacgtatcaggaaatcgcaggaattcgtcatccttttgatgat
gtcgccattgcaaaccgcgctttagcaaggaagaaaaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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