KEGG   Iodobacter ciconiae: EJO50_16090
Entry
EJO50_16090       CDS       T05767                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
iod  Iodobacter ciconiae
Pathway
iod00521  Streptomycin biosynthesis
iod00523  Polyketide sugar unit biosynthesis
iod00525  Acarbose and validamycin biosynthesis
iod00541  O-Antigen nucleotide sugar biosynthesis
iod01100  Metabolic pathways
iod01110  Biosynthesis of secondary metabolites
iod01250  Biosynthesis of nucleotide sugars
Module
iod_M00793  dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:iod00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    EJO50_16090 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    EJO50_16090 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    EJO50_16090 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    EJO50_16090 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    EJO50_16090 (rfbB)
Enzymes [BR:iod01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     EJO50_16090 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind NAD_binding_4 Polysacc_synt_2 3Beta_HSD adh_short
Other DBs
NCBI-ProteinID: AZN37851
UniProt: A0A3S8ZWK3
Position
3656267..3657322
AA seq 351 aa
MILVTGGAGFIGGNFVLDWLAGTDEPVINVDKLTYAGNLDTLASLKDDARHIFVRADIGD
KAVIGELLAKYQPRAVINFAAESHVDRSISGPGEFIQTNVVGTFNLLESVRGYWADLATE
AKAAFRFLHVSTDEVYGSLASDDPAFTETKTYEPNSPYSASKAASDHLVRAWHHTYGLPV
LTTNCSNNYGPYHFPEKLIPLVILNALAGKALPIYGDGQQIRDWLYVKDHCSAIRRVLEA
GVVGETYNVGGWNEKPNLDVVHTICQILDKRQPRRDGKAYAEQITYVTDRPGHDKRYAID
ASKLERELGWKPAETFETGIAKTVDWYLERQDWVQNVTSGAYQNWIEQQYA
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgattttagtaaccggtggtgctggctttattggcggtaattttgtgctggattggtta
gctggcacagatgagcctgtgattaatgtggataagctaacttatgccggtaatctggat
acattagcgtctttaaaagacgatgccaggcatatttttgtgcgtgccgatattggtgat
aaagccgtgattggcgaattgctggccaaatatcagccacgtgcagtgattaattttgct
gccgaatcgcatgtggatcgctctatcagcgggccgggtgagtttatccagaccaatgta
gtgggtacgtttaatttgctggaaagcgtgcgtggctattgggctgatctggcgacagag
gccaaggctgcatttcgctttttgcatgtttcaacagatgaagtctatggctctttagcc
agtgatgatcctgcctttaccgaaaccaaaacgtatgagccaaacagcccgtattcggcc
tccaaggccgcatcggatcatctggttcgcgcctggcatcatacttatggcctaccggta
ctaaccaccaattgctcaaataattacggcccttaccattttccggaaaaactgattccg
ctggtgattttgaacgcactggctggcaaagccctgccaatttatggcgatggccagcag
attcgcgactggctgtatgtaaaagatcattgcagcgccatccgccgtgtactggaagcg
ggtgtggtgggcgaaacttacaatgtaggcggctggaatgaaaagccgaatctggatgtg
gttcacactatttgccagattctggacaaacgccagccacgaagggatggcaaagcgtat
gccgagcaaatcacatatgtaacagaccgcccgggtcacgataagcgttacgccattgat
gcgagcaagctggagcgtgagttaggctggaagccggcggaaacctttgaaacaggcatt
gccaaaacggttgactggtatttagagcgccaggactgggtgcaaaatgtgacatccggt
gcttatcaaaactggattgagcagcagtatgcttag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (7)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (26)   

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