KEGG   Isosphaera pallida: Isop_0148
Entry
Isop_0148         CDS       T01407                                 
Name
(GenBank) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
ipa  Isosphaera pallida
Brite
KEGG Orthology (KO) [BR:ipa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ipa03016]
    Isop_0148
Enzymes [BR:ipa01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     Isop_0148
Transfer RNA biogenesis [BR:ipa03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    Isop_0148
 Prokaryotic type
    Isop_0148
SSDB
Motif
Pfam: PseudoU_synth_1 DUF2344
Other DBs
NCBI-ProteinID: ADV60745
UniProt: E8R650
Position
complement(224387..225214)
AA seq 275 aa
MLRTLKLILAYDGTEFSGWQRQPGHRTVQEVVESALRPLTGEPVAVTASGRTDAGVHALG
QVAHFHTIARHPPEVFLKALNATLPPDVRVVWAEEAPQSFHATLDAQSKRYRYVIDNGPF
ADPFLRRTAWHLFRPLDAPRMNRAVQALRGRHDFRSFETNWPNRMSSVRTILDVQVRRID
HRVELEVEADGFLYNMVRSIAGTAVLVGLGDRPETFVAEVLHAQDRRLAGPTAPPQGLFL
LQVRYGLRDRVARSLGRNGQPPGRFIPSPPFPNPT
NT seq 828 nt   +upstreamnt  +downstreamnt
atgctccgcaccctcaagctgatcctcgcctacgacggcaccgagttttcgggctggcaa
cggcaaccaggccaccgcacggttcaagaggttgttgaatccgcgctccgccccctcacc
ggcgaacccgtggcggtcaccgccagcggacgcaccgacgcaggcgttcacgcgctgggc
caagtcgcccactttcacaccatcgcgcggcacccccccgaggtcttcctcaaagccctc
aacgccaccctgccgcccgacgtgcgagtggtctgggccgaagaagcaccccagtcgttc
cacgccacgctcgacgcccaatccaaacgctatcgttacgtgatcgacaacggacccttc
gccgatcccttcctccgccgcaccgcctggcaccttttccgccctctcgacgcgccgagg
atgaatcgcgcagtgcaagcgcttcgcggccgtcatgacttccgcagcttcgagaccaac
tggcccaaccggatgagcagcgtgcggacgattctggatgtgcaagtccgccggatcgat
caccgcgtcgagttggaggtcgaggccgacggcttcctctataacatggtgcgctcaatc
gcaggcacagcggtcctagtcggcctaggagaccgccccgaaaccttcgtggccgaggtt
ctccacgcccaggaccgccgcctcgccggccccaccgcaccaccccagggcctcttcctg
cttcaggtccgctacggcctgcgggatcgcgtcgctcgctcgctgggccgcaacggccaa
cccccaggccgattcataccatcacccccgtttccaaacccaacatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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