KEGG   Ilyobacter polytropus: Ilyop_1453
Entry
Ilyop_1453        CDS       T01337                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
ipo  Ilyobacter polytropus
Pathway
ipo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ipo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Ilyop_1453
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ipo03021]
    Ilyop_1453
   03019 Messenger RNA biogenesis [BR:ipo03019]
    Ilyop_1453
Transcription machinery [BR:ipo03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     Ilyop_1453
Messenger RNA biogenesis [BR:ipo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Ilyop_1453
SSDB
Motif
Pfam: ATP-synt_ab Rho_RNA_bind Rho_N SAP_new25 OB_RNB Spore_III_AA AAA AAA_25 ResIII
Other DBs
NCBI-ProteinID: ADO83233
UniProt: E3HAP6
Position
complement(1567132..1568370)
AA seq 412 aa
MDDLNNFLLTELKEIARQLGIESWNRYKKKELVDIIEEYYENLTGHTIAWGTLDVLGDGY
GFLRDTNVEKDIYVSASQVRRFKLRTGDLILGEVRKPVGDEKNYALRKVLLVNGGDIQKA
ESRVPFDELVPAYPTEQLILETERKNLSGRIIDLIAPIGKGQRGLIVAPPKAGKTMLISS
IANSIIENNKNSEVWILLIDERPEEVTDIRETVKGAEVFSSTFDEDPKNHIKVTEMVLEK
AKRKLEDGEDIIILMDSLTRLARAYNIVIPSSGKLISGGIDPTALYYPKKFFGSARNIRE
GGSLTIVATALVDTGSKMDDVIYEEFKGTGNMEIHLDRNLSQLRIYPAIDIQKSGTRKEE
LLIKENKLNLIWGIRRYLSEYDRATAAKKLIDTIESTKSNDDLLKAYQKGDK
NT seq 1239 nt   +upstreamnt  +downstreamnt
atggatgatttaaataactttttattaacagagcttaaagagatcgcaagacagctaggt
atagagagctggaacagatacaagaaaaaagaattagtggatataatagaggaatattat
gaaaatctcactgggcatacaatagcctggggtaccttagacgttctaggagacggctat
ggttttttaagagacacaaatgtagaaaaagatatttatgtctctgcttctcaggtcaga
agatttaagttaagaaccggtgatcttattttgggagaagtaaggaaaccagttggagat
gaaaaaaattatgctctgagaaaagttcttttggtaaatggcggagacatacaaaaggca
gaatctagagttccttttgatgaacttgtacctgcctacccaactgagcaacttatcctt
gagacagaaagaaaaaatctgtctggaagaataatagatcttattgcccctataggcaaa
ggtcagagaggtctaatagtagcacctccaaaagccggtaaaactatgctcataagtagt
attgccaactccattatcgaaaacaacaaaaattccgaagtgtggatactccttatagat
gaaagacctgaggaggttacagatataagggagacagtaaagggagcagaggtgttctcc
tctacatttgacgaagatcctaaaaatcacatcaaggtaactgaaatggttttggaaaag
gcaaaaagaaagcttgaagacggtgaagatataataatacttatggactctcttacaaga
cttgcaagagcttataatatagtcataccttcaagtggtaaactgatatcaggaggaata
gatcctactgcattatattatccaaaaaagtttttcgggtctgcaagaaacataagagaa
ggtggaagcctcaccatagtggctacagcattggtagacaccggaagtaagatggatgat
gttatttatgaagagttcaaagggacgggaaatatggagatccacctagacagaaacctg
tctcagcttaggatctatcctgctatagatatccaaaaatcaggaacaagaaaagaagaa
cttttgataaaagaaaacaagctcaaccttatatgggggataagaagatacctctctgaa
tacgacagagctactgccgcaaagaaacttatagatacaatagagtccacaaaaagcaat
gatgatcttttaaaagcttatcagaagggggataaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (41)   

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