KEGG   Ictalurus punctatus (channel catfish): 100304474
Entry
100304474         CDS       T04658                                 
Symbol
esr1
Name
(RefSeq) estrogen receptor
  KO
K08550  estrogen receptor alpha
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ipu03000]
    100304474 (esr1)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:ipu03310]
    100304474 (esr1)
Transcription factors [BR:ipu03000]
 Eukaryotic type
  Zinc finger
   Cys4 estrogen receptor-like
    100304474 (esr1)
Nuclear receptors [BR:ipu03310]
 3. Estrogen like
  3A. Estrogen receptor
   100304474 (esr1)
SSDB
Motif
Pfam: zf-C4 Hormone_recep Oest_recep
Other DBs
NCBI-GeneID: 100304474
NCBI-ProteinID: NP_001187003
Ensembl: ENSIPUG00000019477
UniProt: Q9YHZ7
Position
25:complement(16995798..17027572)
AA seq 617 aa
MSEEQARAEAPAGARQRRRSELEGYSVSLASLKLSPMYPEEEQRTTGGISSTAHYLDGTF
NYTTNPDATNSSVDYYSVAPEPQEENLQPLPNGSSSPPVFVPSSPQLSPFLGHPPAGQHT
AQQVPYYLEPSGTSIYRSSVLASAGSRVELCSAPGRQDVYTAVGASGPSGASGPSGAIGL
VKEIRYCSVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYVCPATNQCTIDRNRRKSCQ
ACRLRKCYEVGMMKGGFRKERGGRIIKHNRRPSGLKERERGYSKAQSGSDVREALPQDGQ
SSSGIGGGVADVVCMSPEQVLLLLLRAEPPTLCSRQKHSRPYSELTIMSLLTNMADRELV
HMIAWAKKVPGFQDLSLHDQVQLLESSWLEILMIGLIWRSIYTPGKLIFAQDLILDKSEG
ECVEGMAEIFDMLLATVARFRTLKLKSEEFVCLKAIILLNSGAFSFCSSPVEPLRDGFMV
QCMMDNITDALIYYISQSGISVQLQSRRQAQLLLLLSHIRHMSYKGMEHLYSMKCKNKVP
LYDLLLEMLDAHRLRPLGKVPRIWADRVSSSPTTTATTPTTNTTTTTTTTTHHPSNGSTC
PADLPSNPPGPGQSPSP
NT seq 1854 nt   +upstreamnt  +downstreamnt
atgtcggaagagcaggctcgcgctgaagctccggctggtgccaggcagcgacgcaggagc
gagctagaagggtattcggtgtctctcgcttccctcaagctctcgcccatgtacccggag
gaggagcagcgcaccacggggggcatttcctccaccgctcactacctagacgggacgttc
aactacaccaccaaccccgatgccaccaactcgtcagtggactactactcagtcgcccca
gagcctcaggaggagaacctgcagccgctgcctaacggctccagcagccctccggtgttc
gttccttccagcccgcagctctcgccgttcctcggccatcctcccgcaggacaacatact
gctcagcaggtgccgtactacctggaaccatcaggaacctccatctacaggtccagtgtg
ttagccagtgcaggatcacgagtggagctgtgcagcgcccccggcaggcaggatgtgtac
accgcagtgggagcctcgggaccatcgggagcttcggggccttcaggagcaatcgggttg
gtgaaggagatccgctactgttcggtgtgcagtgactacgcctcagggtaccactacgga
gtctggtcgtgcgagggctgcaaggccttcttcaagcgcagtatacaaggtcacaatgat
tacgtgtgtccagcgaccaaccagtgcaccatcgacaggaaccgcaggaagagctgtcaa
gcgtgtcgtctacgcaagtgctacgaagtgggcatgatgaaaggaggttttcgtaaggag
cgtggcggtcgcatcatcaagcacaacaggaggccgagtggactgaaggagcgggagcga
ggttatagcaaagcccagagcggttctgatgtgagagaagcgcttccacaggacgggcag
agcagttccgggatcgggggaggggtagcggacgtggtctgcatgtctccggagcaggtg
ttgctgctgctgttgcgggcggagccgcccaccctgtgctcacgacagaaacacagccga
ccctacagcgagctcaccataatgagtctgctcaccaacatggccgacagggagctcgtt
cacatgatcgcctgggccaagaaagtgcctggattccaggacctctctctgcatgaccag
gtacagctgttggaaagctcctggctggagattttgatgattggtctcatctggaggtcc
atctacacacctggaaaactcatcttcgctcaggacctcatcctcgacaagagtgaagga
gagtgtgtggagggcatggctgagatattcgacatgctgctggccacagtggcccgtttc
cgcaccctcaaactcaagtcagaggagtttgtgtgtctcaaagccatcatcctgctcaac
tctggtgcgttttcgttctgctcctcccccgtcgagcccctgagggacggcttcatggtg
cagtgcatgatggataacatcacggatgccctcatatactacatcagccaatcgggaatc
tcggtgcagctccagtcccggcgtcaagcccagctcctgcttttgctctcgcacatcaga
cacatgagctataaagggatggaacacctgtacagcatgaagtgcaagaacaaagttcct
ctgtatgacctgctgctggagatgttggacgcgcataggctccgccccctgggcaaagtg
ccaaggatctgggccgatcgagtgtcgtcttcacctactacaaccgccacaaccccaacc
accaacaccaccaccaccaccaccaccaccacccatcaccccagcaacggctccacgtgt
cccgcagacttaccgtccaacccgccgggtcccggccaaagccccagcccatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (15)   
   RefSeq(nuc) (3)   
   GenBank (6)   
   EMBL (6)   
Protein domain (3)   
   Pfam (3)   
All databases (50)   

Download RDF
DBGET integrated database retrieval system