KEGG   Ictalurus punctatus (channel catfish): 100528272
Entry
100528272         CDS       T04658                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03420  Nucleotide excision repair
ipu04110  Cell cycle
ipu04114  Oocyte meiosis
ipu04120  Ubiquitin mediated proteolysis
ipu04141  Protein processing in endoplasmic reticulum
ipu04310  Wnt signaling pathway
ipu04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100528272 (rbx1)
   04120 Ubiquitin mediated proteolysis
    100528272 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    100528272 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    100528272 (rbx1)
   04350 TGF-beta signaling pathway
    100528272 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    100528272 (rbx1)
   04114 Oocyte meiosis
    100528272 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ipu04121]
    100528272 (rbx1)
   03400 DNA repair and recombination proteins [BR:ipu03400]
    100528272 (rbx1)
Enzymes [BR:ipu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     100528272 (rbx1)
Ubiquitin system [BR:ipu04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   100528272 (rbx1)
  Multi subunit Ring-finger type E3
   SCF complex
    Ring finger protein
     100528272 (rbx1)
   Cul2 complex
     100528272 (rbx1)
   Cul3 complex
     100528272 (rbx1)
   Cul4 complex
     100528272 (rbx1)
   Cul7 complex
     100528272 (rbx1)
   Cul8 complex
     100528272 (rbx1)
   Cul9 complex
     100528272 (rbx1)
DNA repair and recombination proteins [BR:ipu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      100528272 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      100528272 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 100528272
NCBI-ProteinID: NP_001187471
Ensembl: ENSIPUG00000022734
UniProt: E3TEE7
Position
12:complement(32270763..32273311)
AA seq 108 aa
MAAAMDVDTPSGTNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggctgcgatggacgtcgacaccccgagcgggacaaacagcggcgccagtaagaag
cgttttgaagtcaaaaagtggaatgcagtggctctgtgggcctgggacatcgtggtggat
aactgcgccatctgcagaaaccacatcatggacctgtgtatagagtgtcaggccaatcag
gcttctgccacatcagaggagtgcacagtggcctggggagtgtgtaatcatgcatttcat
ttccattgcatctcccgatggttaaagacgcggcaggtgtgtcctctggacaacagggag
tgggagttccagaagtacggacactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (7)   
   KEGG PATHWAY (7)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (352)   
   KEGG ORTHOLOGY (1)   
   RefGene (347)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (379)   

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