KEGG   Ictalurus punctatus (channel catfish): 108255640
Entry
108255640         CDS       T04658                                 
Symbol
smad4
Name
(RefSeq) mothers against decapentaplegic homolog 4 isoform X1
  KO
K04501  mothers against decapentaplegic homolog 4
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04068  FoxO signaling pathway
ipu04110  Cell cycle
ipu04310  Wnt signaling pathway
ipu04350  TGF-beta signaling pathway
ipu04371  Apelin signaling pathway
ipu04520  Adherens junction
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    108255640 (smad4)
   04350 TGF-beta signaling pathway
    108255640 (smad4)
   04371 Apelin signaling pathway
    108255640 (smad4)
   04068 FoxO signaling pathway
    108255640 (smad4)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    108255640 (smad4)
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    108255640 (smad4)
SSDB
Motif
Pfam: MH2 MH1 IRF-3
Other DBs
NCBI-GeneID: 108255640
NCBI-ProteinID: XP_053530437
Ensembl: ENSIPUG00000023608
UniProt: A0A2D0PQ63
Position
22:complement(72816..80945)
AA seq 551 aa
MRASSGLLLFIIVINDGGINARAHSRLYSSQVTVSPWGVCVCARSMSVSSSDACLSIVHS
LMCHRQGGESESFSKRAIESLVKKLKEKKDELDSLITAVTTNGAHPSKCVTIQRTLDGRL
QVAGRKGFPHVIYARLWRWPDLHKNELKHVKYCQYAFDLKCDSVCVNPYHYERVASPGID
LSGLNLGGTGPSAGLLVKEEFDPQPSHSSSDVSHSIQTIQHQPAPSQPAPPTSTRPPLPE
TFSSPALMPPPEAGSSAPSPAFSSMAPTPASGGGSWPRGSGFPTNLTNPSGALQHHPPQY
WPVHNELIFQPPISTHPAPDYWCSIAYFEMDVQVGETFKVPSSCPVVTVDGYVDPSGGDR
FCLGQLSNVHRTEAIERARLHIGKGVQLECKGEGDVWVRCLSDHAVFVQSYYLDREAGRA
PGDAVHKIYPSAYIKVFDLRQCHRQMQQQAATAQAAAAAQAAAVAGNIPGPGSVGGIAPA
ISLSAAAGIGVDDLRRLCILRMSFVKGWGPDYPRQSIKETPCWIEIHLHRALQLLDEVLH
TMPIADPQPLD
NT seq 1656 nt   +upstreamnt  +downstreamnt
atgcgcgcgagcagcggtcttctcctctttattattgttattaatgatggcggaataaac
gcacgcgcacacagcagactgtacagctctcaggtgactgtatccccatggggagtgtgt
gtgtgtgcacgcagcatgtcggtgtcgagcagtgacgcgtgtctcagcattgtgcacagt
ctgatgtgccaccggcagggtggtgagagtgagagcttcagtaaaagagccatcgagagt
ctggtgaagaaactgaaggagaagaaagatgaactcgactctctgatcaccgccgtcacc
accaatggagctcatcccagcaagtgtgttactatacagcgcacccttgacgggagacta
caggttgctggccgtaagggctttccccatgtgatctatgcgcggttatggcggtggcct
gatctccataagaacgagctgaaacatgtgaaatactgccagtacgcctttgacctgaag
tgtgacagtgtgtgtgtaaacccctaccactacgagagggtggcatcacctggtatcgat
ctgtctggactgaatctgggtggaacagggcccagtgcaggtctcttggtaaaggaggaa
tttgaccctcaaccgtctcactccagctctgatgtatcacacagtattcagaccatccag
catcagcctgccccctctcaaccagctccacccacttccacacgccccccactccctgag
actttcagcagccctgcacttatgccaccgcccgaggcaggaagctctgcccccagtcct
gctttctccagcatggctcctaccccggcctcaggtggtggctcctggccgagagggagt
ggctttccaacaaacctgaccaatccaagcggggctttgcagcaccacccacctcagtac
tggcctgtacataatgaactgatcttccagcccccgatatctacacatccagctccagat
tactggtgttctatagcgtattttgagatggatgttcaggtgggcgagacttttaaggtg
ccgtcttcatgtccggtggtgacagtggatggttatgtggatccatcaggaggagatcgg
ttctgcctgggccagctcagcaacgttcaccgcacagaggccatcgagagagccaggttg
cacattggtaaaggggtacagttggagtgtaagggtgagggtgatgtttgggtacgatgc
cttagtgaccacgccgtgtttgtccagagttattatcttgatcgggaagctgggcgtgca
ccaggtgacgctgtccacaaaatttaccccagtgcttacatcaaggtgtttgacctgagg
cagtgccaccggcagatgcagcagcaggcagcaacggctcaggcagcagcagcggctcag
gctgcagcagtcgcaggaaacataccaggacccggatcagtaggagggatagcaccagct
atcagtctatctgcggcagcaggtatcggggtggatgatctgcgacgtttgtgtattctg
cgcatgagttttgtgaaaggttggggtcctgattatcctcgtcagagcatcaaagagacc
ccatgttggattgagattcacctacacagagcgctgcagctgctggacgaggttctacac
accatgcctatagctgatcctcaaccacttgactga

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (3)   
   Pfam (3)   
All databases (58)   

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