KEGG   Ictalurus punctatus (channel catfish): 108258033
Entry
108258033         CDS       T04658                                 
Name
(RefSeq) poly [ADP-ribose] polymerase 1
  KO
K24070  poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03410  Base excision repair
ipu04210  Apoptosis
ipu04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    108258033
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    108258033
   04217 Necroptosis
    108258033
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ipu03032]
    108258033
   03036 Chromosome and associated proteins [BR:ipu03036]
    108258033
   03400 DNA repair and recombination proteins [BR:ipu03400]
    108258033
Enzymes [BR:ipu01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.2  Pentosyltransferases
    2.4.2.30  NAD+ ADP-ribosyltransferase
     108258033
DNA replication proteins [BR:ipu03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    108258033
Chromosome and associated proteins [BR:ipu03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    108258033
DNA repair and recombination proteins [BR:ipu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     108258033
SSDB
Motif
Pfam: PARP PARP_reg zf-PARP PADR1_N WGR PADR1_Zn_ribbon BRCT BRCT_2
Other DBs
NCBI-GeneID: 108258033
NCBI-ProteinID: XP_053531642
Ensembl: ENSIPUG00000020250
UniProt: A0A9F7RA89
Position
25:16500248..16524894
AA seq 1018 aa
MADAQDDKLYKAEYAKSGRASCKKCKENIAKDSLRMAIMVQSPMFDGKVPHWHHFSCFWL
RAAAQSTSDISGFTDLRWEDQEKVKKAIESGGSVGGKAERKGAGKGEKSLNDFAVEYAKS
NRSTCKGCDQKIEKDQIRVSKKSVDPEKPQLGLIDRWYHTGCFVSRREELAFKPEYSAAQ
LKGFAALRAEDQDELKKRLPTVKTEGKKKADSVDGASKKQEEEKKQLEIRLKEQSQLIWG
IKDKLKKYCSANDMKELLIANGQDVPSGESNILDRLSDCMAFGSLKPCETCQGQLVFKSD
AYYCTGDISAWTKCVFKTQTPSRKDWVTPKEFHEIPFLKKFKFKRQDRVFPKEPPAAPAA
APASSAAASASASAASSTSGSGFPTELPTEVPTDKPLTGLKVLAVGKLSKNKDELKAAVE
ELGGKITSTVNKATFCLSSRKEVEKMSKKMEEVRDAGVRVVAEDFLTDIKSSGKALRELI
SLHGISPWGAEVKLEAQASSVAAKSSRASKSSGRSKEDEGGSKAKKMKLTVKGGAAVDPD
SGLEDCAHVLDQNGKIYSATLGLVDIVRGTNSYYKLQLLEDDVQKRYWVFRSWGRVGTKI
GGNKLEKFYDKNSAMDNFRSMYEEKTGNCWTSSSFTKYPNKFYPLEIDYGQDEEAVKKLT
ASSGTKSQLAKPVQELIRMIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYSLLTEV
QQAVSDNASEALILDLSNRFYTLIPHDFGMKKPPLLSNLDYIQAKVQMLDNLLDIEVAYS
LLRGGAEDNKKDPIDLNYEKLKTTIEVVDKSSEEAQVIQQYVKNTHAATHNTYTLEVEEI
FKIAREGEYQRYRAFKDLHNRQLLWHGSRTTNYAGILSQGLRIAPPEAPVTGYMFGKGLY
FADMVSKSANYCHTSQADPVGLILLGEVALGNMHELKKASHITKLPKGKHSVKGLGRTAP
EPGATVSLNGVDVPLGKGANTNIDDTSLLYNEYIVYDVAQVNLKYLLKLRFNYQTSLW
NT seq 3057 nt   +upstreamnt  +downstreamnt
atggcggatgcacaggacgacaagctttacaaagccgagtatgcgaaaagtggacgcgct
tcgtgtaagaaatgtaaagaaaacattgcgaaggactcgctgaggatggccatcatggtg
cagtcgcccatgtttgatgggaaagtgccgcactggcatcacttctcctgcttctggctc
cgcgcggccgcgcagtccacgtccgacatctcgggcttcaccgatctccgctgggaggac
caggagaaagtgaagaaagccatcgaaagcggagggtctgtcggaggtaaagctgagcgt
aaaggagcaggtaaaggggagaagtctctgaatgacttcgcagtggagtacgcgaaatcc
aaccggagcacctgcaaaggctgtgaccagaaaatagaaaaggaccagatccgcgtttcg
aagaaatcggtggacccggagaagcctcagctgggtctgatcgaccgctggtaccacacg
ggctgcttcgtgagccggcgcgaggagctggcgttcaaacccgagtacagcgcggctcag
ctcaaaggcttcgccgctctgcgtgccgaggaccaggacgagctgaagaagagactccct
actgtcaagactgaggggaagaagaaagccgactctgttgatggagcttctaagaagcag
gaagaggagaaaaaacaactggagatcaggctgaaggagcagagccagttgatttgggga
attaaagacaagctgaagaaatactgttcggccaatgacatgaaagagcttctgatcgct
aacggccaggacgttccctcaggagaatctaacatcctcgaccgcctgtcggactgcatg
gctttcggatcgttgaagccctgcgagacgtgtcagggtcagctcgtgttcaagagcgac
gcctactactgcacaggagacatctctgcctggacgaagtgcgtgttcaagacgcagacc
cccagccggaaagactgggtcactcccaaggagtttcatgaaattcccttcctgaagaag
tttaagtttaagcgtcaggaccgcgttttccccaaagagcctcccgctgctcctgccgct
gctcctgcgtcgtccgcggccgcttcggcttctgcctccgctgcttccagcacctccggc
tccggttttcccaccgagctccctacagaagtgcccacagataagcctctgaccgggctg
aaggtgctggctgtggggaagctgagtaagaacaaggacgagctgaaggctgcagtggag
gagctgggaggaaaaatcaccagcactgttaataaagcaacgttctgcctcagctccagg
aaggaagtcgaaaagatgagtaagaagatggaggaggtgagggacgccggcgtgcgtgtc
gtcgccgaagatttcctcaccgatatcaagtcctcggggaaggcactacgagagctcatc
tccctgcacggcatctcaccctggggcgccgaggtcaaactcgaggcccaggcttcgtcg
gtggccgcgaagtccagcagagcctccaagagctccgggagaagcaaagaggacgagggt
ggcagtaaggcgaagaagatgaagcttacggttaaaggtggagcagcagttgatccggac
tcaggtctggaggactgcgctcacgtgctggatcagaacgggaagatctacagcgctaca
ctggggctggtggacatcgtccgcggaacaaactcctactacaaactccagcttctggag
gacgacgtacagaaacggtactgggtgttcaggtcctggggtcgagtaggaaccaagatc
ggaggaaacaaactggagaagttttatgacaagaactcggccatggataacttccgcagc
atgtacgaggaaaaaaccggcaactgctggacctcgagcagcttcaccaaatatcccaac
aagttttaccctctcgagattgattatgggcaggatgaggaagcagtgaagaagctgaca
gccagcagcggcaccaagtctcaactcgccaaaccggtacaagagctcatccgcatgatc
ttcgacgtggagagcatgaagaaggccatggtggagtttgagatcgacctgcagaagatg
cctctggggaaactgagtaagagacagatacagagtgcatactctctcctgactgaggtc
cagcaggctgtatccgataacgcctccgaggctctgattctggacctgtccaatcgtttc
tacactctgataccacacgacttcggcatgaagaagcctccgctgctgagtaacttggac
tacattcaggctaaagtgcagatgctggacaacctgctggacatcgaggtggcgtacagt
ctcctgcgcggcggagctgaggacaacaagaaagacccgattgacctcaactacgagaaa
ctcaaaaccacgatcgaggtggtggataaatcatcagaagaagctcaggttattcagcag
tatgtgaagaacacgcacgctgcaacgcataacacctacacactcgaagtagaagagatc
tttaagatcgccagagaaggtgagtaccagcgttaccgcgccttcaaagatttacacaac
cgccagctcctgtggcacggctcacgcacaaccaactacgctggcatcctgtctcagggt
ctgcgcatcgccccgcccgaggctcctgtgaccggttatatgtttggtaaaggtttatat
ttcgctgacatggtgtctaagagcgcaaactactgccacacgtcccaagcggatcccgta
ggcctcatcctgttaggagaagtcgctctcggcaacatgcatgaacttaaaaaggcttca
cacatcacaaaactgccgaaagggaaacacagtgtgaagggtttgggaaggaccgccccc
gaacctggcgctaccgtctctcttaacggagtggacgtgccgctgggcaaaggcgccaac
acgaacatcgatgacacgagtctgctttacaacgagtatattgtgtacgacgttgctcag
gtgaatctgaaataccttctgaaactccgcttcaattatcagacgtccctctggtga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (46)   

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