KEGG   Ictalurus punctatus (channel catfish): 108259767
Entry
108259767         CDS       T04658                                 
Symbol
myo1ca
Name
(RefSeq) unconventional myosin-Ic isoform X1
  KO
K10356  myosin I
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    108259767 (myo1ca)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ipu01009]
    108259767 (myo1ca)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ipu04131]
    108259767 (myo1ca)
   03036 Chromosome and associated proteins [BR:ipu03036]
    108259767 (myo1ca)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ipu04812]
    108259767 (myo1ca)
   04147 Exosome [BR:ipu04147]
    108259767 (myo1ca)
Protein phosphatases and associated proteins [BR:ipu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     108259767 (myo1ca)
Membrane trafficking [BR:ipu04131]
 Endocytosis
  Phagocytosis
   Others
    108259767 (myo1ca)
 Others
  Actin-binding proteins
   Myosins
    108259767 (myo1ca)
Chromosome and associated proteins [BR:ipu03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    108259767 (myo1ca)
Cytoskeleton proteins [BR:ipu04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Myosins
     108259767 (myo1ca)
Exosome [BR:ipu04147]
 Exosomal proteins
  Proteins found in most exosomes
   108259767 (myo1ca)
SSDB
Motif
Pfam: Myosin_head Myosin_TH1 IQ nSTAND3 AAA_22 UTP15_C AAA_16 N-Term_TEN Zeta_toxin TsaE Sigma54_activat
Other DBs
NCBI-GeneID: 108259767
NCBI-ProteinID: XP_053532981
Ensembl: ENSIPUG00000021454
UniProt: A0A9F7THF1
Position
28:complement(2120129..2146363)
AA seq 1089 aa
MCIRGVEVEVDGGVRLVMESSLSARDRVGVQDFLLLDNHTSEAAFIENLRRRYKENLIYT
YIGSVLVSVNPYKELGIYSKANMERYRGVNFYEISPHIFGLADNSYRALRTTRKDQCILI
SGESGAGKTEASKKILQYYTATCPTRNNTHSIRERLLQSIPVLEAFGNAKTLRNDNSSRF
GKYMDLQFDYKGAPIGGHILNYLLEKSRVVHQNHGERNFHIFYQLLESGDSSLLTRLGLD
MTNPQHYRYLVKGNCPRVSTISDKSSWKAVSKGLTVIGFNEEEVEELLKVVASVLHLGNT
LFGEDEYGQTHFTTETPLTYLTELLGVEGSALSEALTHKKIVAKGEEMIGPLTLEQALSA
RDALAKAIYGRTFTWLVQKINQSLAFQDEVYYTSRCSSVIGLLDIYGFEVFQSNSFEQFC
INYCNEKLQQLFIEVTLKSEQEEYEAEGIGWESVEYFNNKIICDLVEEKFKGIIAILDEE
CLRPGDATDITFLEKLEDSLGGHAHFMTHKLANGKSRKAVGREEFRLLHYAGAVNYNVNG
FLDKNNDLLYRNLKEVMCQSRNSIVKQCFHPDELTDQRRPETVTHTHTHTHTHTHTHTHT
TTTTTLSLSLSLSLSLSQLLCFQAATQFKLSLAKLMEILMSKEPSYVRCIKPTDTKQPER
FEEVLVRHQVKYLGLMENLRVRRAGFAYRRSFEAFLQRYKPLCPDTWPNWQGKLSDGVST
LVKHLDYKPEEYKLGRSKIFIRFPKTLFRTEDALELKKPTIAITLQKCWRGYREWAKYQR
IRHATITIQSWWRGVKGRRRAKRRRQAVDTIRTLIKGFILRHEPRCPDNEYFLDHVRFSY
LMTIKRNLPKSVLDRTWPVPPPSLEEASVYIHRLCIRNMVNDYCRKIQPEWKNQLEQKVV
ASGMFRGQKDSYPQSVPRLFVGTRLENEEINLKVRQTLGSENKVKYGVPVIKYDRHGYRA
RPRQLLMTGSSVVLVQESKIKQRIDYGSLLGISVSSLSDGFFVLHVPTADSKQKGDLVLQ
SDHVIEAVTKLAVMSDKIHVVNVSQDSIRFAIARGKEGIIDFTCGAELRVVKAKNGHLAV
TAPRINSSV
NT seq 3270 nt   +upstreamnt  +downstreamnt
atgtgcattaggggtgtggaggtggaggtggatggaggcgtgaggctggtgatggagagc
tctctgtcagcgagggatagggtgggtgtgcaggatttcctgcttctggacaaccacacg
agcgaagcggctttcatcgagaacctgcggcggcgttataaagagaacctcatatacacg
tatatcggctcggtgctggtgtcggtgaatccgtacaaagagctcggaatctactccaaa
gcaaacatggagcgctacagaggagtcaacttctatgagatttcaccacacatcttcggc
ttggcggataactcgtaccgtgccctgcgcaccacgcgtaaggatcagtgcatcctgatc
tcaggagagagcggggcaggaaagacagaggcatcgaaaaaaatcctgcagtactacacc
gcaacctgccccacacgcaacaacacacactccatccgagagaggctgctgcagtccatc
cccgtgctggaggcgtttgggaacgccaaaacgttgcgtaatgacaactccagccgcttc
ggaaaatacatggatttgcagtttgactacaagggtgccccgatcggcggccacatcctg
aactaccttctggagaagtctcgggtggtgcaccaaaaccacggagagaggaacttccac
atcttctaccagctgctggagtcaggggacagctcgctgctgacgaggctggggctggac
atgaccaacccacagcactaccgctacctggtgaagggcaactgtccaagggtgagtacc
atcagcgataagagcagctggaaagctgtaagcaaaggtctgaccgtcattggcttcaac
gaggaggaagtggaggagctactgaaggtcgttgcgagtgttctgcatttgggaaacacc
ctgtttggagaggatgagtacgggcagacacacttcaccacggagactccgctcacatac
ctcacagagctgctgggtgtggaaggctcagctctgagtgaagctcttactcataagaag
attgttgctaaaggagaggagatgattggcccgctgaccctcgagcaggctctctcggct
cgagacgccctggccaaagccatatatggtcgtacttttacttggcttgtccagaagatc
aaccaatcactggcctttcaggacgaagtgtactacaccagcagatgctcctcggtaatc
ggacttctggacatctacggctttgaggtctttcaaagcaacagttttgaacagttctgt
atcaattactgcaacgagaagcttcagcagcttttcatcgaagtcacgctgaagagcgag
caagaggagtacgaggctgaaggcatcgggtgggagtcggtggaatacttcaacaacaaa
atcatctgtgacttggtggaggagaaattcaaaggcatcattgcgatcctggatgaagag
tgtttaaggccaggggacgccactgacatcaccttcctggagaagctcgaggacagtctg
ggaggccacgcccatttcatgacacataaactggccaatgggaagagtcgcaaggctgta
gggcgggaggagtttcggctgctacactatgccggagcggtcaactacaacgtgaatggg
ttcctggacaaaaataatgaccttctgtacaggaacctaaaagaggtgatgtgccagtct
aggaattcaatagtaaagcagtgtttccatccagatgaactgacagaccagaggagacca
gaaacggtaacacacacacacacacacacacacacacacacacacacacacacacacact
actactactactactctctctctctctctctctctctctctctctctgagccagcttttg
tgtttccaggctgctacccagtttaagctgagtttggccaagctaatggagattctgatg
tctaaggagccgtcatacgtccgctgcatcaaacccactgataccaaacaaccagaaagg
tttgaggaggtgttggtcagacaccaggtgaagtacctgggcttgatggagaatctgaga
gtaagaagagcaggatttgcatacagacgaagcttcgaggccttcctacaaaggtataaa
cctctgtgtccagacacttggccaaactggcagggaaaactatcagatggtgtctctacc
ctagtcaaacacctggactacaaaccagaggagtacaaactgggcaggtccaaaatcttc
atccgtttcccaaaaacactcttccggactgaggacgctctggagctcaagaaaccaacc
atcgctatcacattacagaaatgctggagaggctacagggaatgggccaaataccaacgc
atcagacatgcaacaatcacgatccagtcatggtggaggggggtcaaagggcgcaggaga
gccaaacgccgcagacaagcagtagacaccatccgcacgttaataaaaggcttcattctg
aggcacgagcctcgttgtcccgataacgagtatttcttggaccatgtacgcttctcatat
ctgatgaccatcaagaggaacctaccaaagagtgttctggacaggacttggccagtacca
ccaccgtcactcgaagaggcctcggtgtacatccaccgtctgtgtatacgcaacatggtg
aatgactactgcaggaaaatccaacccgagtggaagaaccagttggagcagaaggttgta
gccagtggtatgtttaggggtcagaaggacagctaccctcaaagtgtccctaggcttttt
gtgggcaccaggctggagaacgaagagatcaatctgaaagtgcgacagactctcggaagt
gaaaacaaagtgaagtatggtgtgccagtcatcaagtacgaccggcacggataccgtgcc
aggccgcggcagctgctgatgaccggctcctctgttgtccttgttcaggagtcgaaaatc
aagcagcgcattgactacggttcactgctgggcatctcagtcagttccctcagtgatggc
ttttttgtcctgcatgtgcccactgctgacagcaagcagaagggcgacctggtgctgcag
agtgaccacgtgatcgaggccgtcaccaaactggctgtcatgtcggacaagatacacgtc
gtcaacgtcagtcaggacagtattaggtttgcaatagcccggggcaaagagggcatcatt
gacttcacctgtggggcagaactacgagtggtcaaagccaagaatggacacctggctgtg
acggccccacgaatcaacagcagcgtatga

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (11)   
   Pfam (11)   
All databases (47)   

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