KEGG   Ictalurus punctatus (channel catfish): 108259884
Entry
108259884         CDS       T04658                                 
Symbol
usp43b
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43
  KO
K11856  ubiquitin carboxyl-terminal hydrolase 43 [EC:3.4.19.12]
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ipu01002]
    108259884 (usp43b)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ipu04121]
    108259884 (usp43b)
Enzymes [BR:ipu01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     108259884 (usp43b)
Peptidases and inhibitors [BR:ipu01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   108259884 (usp43b)
Ubiquitin system [BR:ipu04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    108259884 (usp43b)
SSDB
Motif
Pfam: UCH UCH_1 TetR_C_13
Other DBs
NCBI-GeneID: 108259884
NCBI-ProteinID: XP_017315151
Ensembl: ENSIPUG00000008292
UniProt: A0A2D0QBR7
Position
2:25316573..25415051
AA seq 1216 aa
MEKQREQQVKGTSRKSKATKHKDKKRAAGKAFRKKSFKSVGTFVAKIFKSLGAWTHGRDA
AEPLDAEDDDGGFRVGAPCTNLANVKEDERERGVKMSTLQSRASLKERLSLSYGDKTPGV
LGLKNHGNTCFMNAVVQCLSNTDLLAEYLGLEHYKMDIGENTMNHVKKVWSEDAQLAPGE
VTEQLAALVRALWTLEYTPQLSVEFKTIVSKYGSQFRGNSQHDALEFLLWLLDRIHEDVN
SSLSSPYGKDRIKTSGKDIAGGEELANSELPDQQPGVRHSFVQEHFQAQYKSSLTCPHCL
KQSHTFDPFLCISLPIPLRQTRPVCVTLVFSTKGQRYLRVGLAVPLFGSLACLRRMVADE
GKISPDQVILTEIYTTGFQRSFFDDDDLTSIAENDVIYAFQAPPLYIRGGSTRISGYHHS
LPSSPYSSSGPEAQRLAASGALSSEFLNHGGGTAKILMLVCNAAGAGQQAVRFGPPFLMR
EDRSVSWDQLQQSILSKLYYLMISGAQPQNNRVLFKIRVVGGSVSCSYLNPQDGRPLYHP
AVDRALKLCGSGGPPHVKLIVEWEHRIKDCLFGNIQEEVVKDCESVRAQQQQHVQQHSCT
LDECFQLYTKEEQLAPDDAWKCPHCKQLQQGMVQMSLWTLPDILILHLKRFRQVGERRNK
LSTLVRFPLTALDMAPHMVKRSNCTRLPSAWKQQLHQRTETGQHPEDFLYDLYAVCNHHG
GMHGGHYTAYCRNSVDGQWYGYDDSSVELVPEGEVCTREAYILFYQRRNSIPAWSASCSL
RGSTSSSVSNHWLVRLTSISEESQTSSPTTKTSSAPEPQTPTSPVFYEQPKGDADGFGSR
PFVRGTQGRSVSLRSPTKNKENLAKVLPLRWSFGSKDRKKVTSVPQTTPLQSGELVEYLE
SGRRPRCTKEPIVSLVASPAQSKAQLPVEDSLSSPSGSSGFSGAERGSCREPDSPRVPEG
QSRPASDRGTTKGRDEGLLTRRTSKRRQEQHGKNQDGQSRRESASGHQPGTSTAQSFANS
TSESKNSTLKQHWNQPAGATRTLCSQNQQDDVAGSRKEETHDIPAFLMPGNVKKDNQSKD
VRAKEAGQGRTLTNKSSNKLSVSNGTPNGLVAEAKKGNGTHRSSSARYYNKTLINGRETH
SGGGGGGDIKRALSSSSLQSRLDLNLRRTVSLQRNGLLVPPQKGHTADKPSYNTLQRNKY
STTSLGRQRPVPESCF
NT seq 3651 nt   +upstreamnt  +downstreamnt
atggagaagcagcgcgagcagcaagtgaaggggacatcgcggaaatccaaggccactaag
cacaaggataaaaagcgagccgcagggaaagcgttccgtaaaaagtcgttcaaatcagtc
gggactttcgtggcgaagattttcaaaagtttaggcgcctggactcacggcagagacgcg
gccgagccgctggacgcagaggacgatgacggcggattccgggttggagcgccttgtacg
aatttagcgaacgtgaaagaagacgagagggagcgtggagtgaaaatgtccacgcttcag
tcgcgcgcttcactgaaagagcggctttcattgtcttacggtgataagactcccggggtt
ttggggctgaagaaccacgggaacacctgcttcatgaacgcggtggtgcagtgcctgagc
aacaccgacctgctggctgagtacctcggattggagcattataaaatggatattggtgaa
aacacgatgaatcacgtgaagaaagtgtggagtgaagacgcgcagctcgcgccgggagag
gtgactgagcagctggcggcgctcgtgagggcgctctggacgctggagtacactcctcaa
ctctcagtggagtttaagacgattgtgtccaagtatggctctcagttccgagggaattcc
caacacgatgctctggagttcctgctgtggctgcttgaccgtatccatgaagacgtcaac
tcctcattatcatccccatatggaaaagacaggatcaaaaccagtggaaaggatattgca
ggaggggaggaattagctaactctgagcttccagatcagcagccgggtgtacgtcacagc
tttgtacaggagcacttccaggcccagtacaagtcatctctgacatgtcctcattgcctt
aagcagagtcacacctttgatccattcctttgcatctctcttcccatccctttgcgtcag
accaggccagtgtgtgtaactctggtgttcagcactaaagggcagaggtacttaagagtg
ggactggctgtgcctttattcggttctctggcctgtctgcgcagaatggtggcagatgag
ggaaagatttcccccgaccaagtgattttgactgaaatttacacaactggtttccagcgc
tctttttttgatgatgatgacttgaccagcatcgcagaaaatgacgtcatttatgccttc
caagctccgccgctttacatccggggaggatccactagaatatcaggctaccaccacagt
ctcccttcttcaccgtactcgtcgtctgggcccgaggctcagagactggctgcatccggg
gcactctcctccgagttcctcaaccatggaggcggaacagcaaagattctaatgctggtg
tgtaacgcagctggagcaggccaacaagctgtgaggtttggaccaccgttcctgatgaga
gaggacaggtcagtgtcatgggatcagctgcagcagagcatcctcagtaaactctactat
ctgatgatcagtggagcacagccacagaataacagagtcctgtttaagatacgtgttgtt
gggggatcagtgtcctgtagctacttgaatccgcaggatggacgtccgctttaccatccc
gcggtagacagagctctaaagctgtgtggttctggtggtcctccacatgtgaagctgatt
gtggagtgggaacacagaataaaagactgtctctttggtaacatccaggaggaggtggtg
aaggattgtgagagtgtacgtgcccagcagcagcagcatgttcagcaacatagctgcaca
ctggacgaatgctttcaactttatactaaagaggagcagctagctccagacgacgcatgg
aagtgtcctcactgcaagcagctgcagcaaggcatggttcagatgagtctgtggacactc
ccagacatcctcatcctccacctcaagcgtttcaggcaggtgggcgagcgacgaaacaag
ctctccactctcgtacgcttcccgctcacagccctggacatggcaccccatatggtcaag
aggagtaactgcacccgcctgccttccgcatggaaacagcagcttcatcaaaggactgaa
acaggccaacatcctgaggacttcctgtatgacctatacgcggtgtgtaaccatcatgga
ggcatgcacggaggtcactacacagcatactgcaggaattcagtggatggccagtggtat
ggttacgatgatagcagcgtagagctggtgcctgagggtgaagtgtgtacccgcgaggca
tatatcctcttttaccagagacgcaacagcattcctgcatggtcagccagctgctcgctc
cgaggctctacaagctcctccgtgtctaatcactggctcgtccgtttgacgtctatttca
gaagaaagccaaacctcgagtcccacgaccaagacctcctcagctcctgaacctcaaacg
ccaacttcccctgttttctatgagcagccaaaaggagatgctgatggatttgggtcgaga
ccatttgtccgtggcacccaaggccgtagcgtaagcctgcgttcacccaccaagaacaag
gagaacctggccaaagtgcttcctctacgctggtcttttggttccaaggaccgcaagaaa
gtcacctctgtccctcagaccacaccactgcagtctggagaactggtggagtacctggaa
tccggacggaggccacggtgcaccaaggagcccatagtgagcctggtggctagtcctgct
caaagtaaagcccagcttcctgtggaagactcgctcagctcgcctagtggcagcagcggc
tttagtggagcggagcgtggaagttgtcgtgagccagactcgcctcgagtacctgaaggc
cagagcagaccagcttcagacagaggcactactaagggcagagatgaaggtttactaacc
aggaggacatcaaagaggagacaggagcaacacggaaagaatcaagacggtcagtcccgt
cgcgaatccgcttctgggcatcagcctgggactagcacagctcaaagttttgcgaacagc
acaagtgaaagcaaaaattccacattaaagcaacactggaaccagccagctggagctacc
aggactttgtgcagtcaaaaccagcaagatgatgttgcagggagcaggaaagaggagact
cacgacatcccagcattccttatgccaggcaatgttaagaaggacaaccagtcaaaggac
gtacgtgccaaagaagcaggtcaaggaagaacgctaacaaataagagctcaaacaagctg
tccgtgtccaacggcactccaaatggactggtagcagaggcgaaaaaaggcaatggcacc
cacaggagcagcagtgcacggtactacaacaagactctgatcaatggaagggaaacccac
agtggtggtggtggtggtggggatattaagcgtgcgctgagctcttccagccttcaaagc
agactggatctgaatctgaggaggacggtgtccctccagaggaacgggttgctggttcct
cctcagaagggacacactgctgataaaccgtcctacaacacattgcagaggaacaaatat
agcaccacttcactaggcagacagagaccagtgcccgagtcctgcttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (48)   

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