KEGG   Ictalurus punctatus (channel catfish): 108260041
Entry
108260041         CDS       T04658                                 
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1 isoform X2
  KO
K05222  transient receptor potential cation channel subfamily V member 1
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04080  Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    108260041
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ipu04040]
    108260041
Ion channels [BR:ipu04040]
 Voltage-gated cation channels
  Transient receptor potential channel (TRP)
   108260041
SSDB
Motif
Pfam: Ank_2 Ank Ion_trans Ank_4 Ank_3 Ank_5 PKD_channel
Other DBs
NCBI-GeneID: 108260041
NCBI-ProteinID: XP_017315455
Ensembl: ENSIPUG00000013470
UniProt: A0A2D0QDL1
Position
28:complement(13953361..13969405)
AA seq 783 aa
MEPFSLDTDDRSDEERTKTKANKKDRQAYGKAKAPMDTELAEDHGDFACQVRINLNFSDE
IQGIKAEPDQHERFDIKRLFDAVSKGDVNRLVSLEEYLIKTNKKLTNNEYRPNGKTALMK
ALLNLKNGDNKAVEHLLGIAERMGHLDKLVNAAYTDPYYEGQTALHIAIERRNKRYVELL
IQKGANVHAKACGTFFQPLDEACFYFGELPLSLAACTNQKDIVDLLMDKADVRCTDTLGN
TVLHALMMVADNSPENTDFVISMYDYILTKDAAKNPKEKKLEDIENNQGLTSIKLAAKLG
RIGLFEHILHREFQQEECRHLSRKFTEWAYGPVYASLYDLDSVDSYEPNSVLEIVVYGTE
IPNRLEMLQTEPLNKLLEDKWNRYAHRIFLFKFIVYIIYLIIFTTVSYYREEGTDEKRPP
FPIRIYTPKNVERKIPDGYLLFAGQVIMAIGSLYFFISVLMNIKRKRPSLKTLLVDGYSE
LLFLLQAVFFIICAGLYCGGMDEYLAFLVLSVALCWVNVLYFSRGTRHMGIYSVMIQKMI
LSDILRFLFVYVVFLFGFSAAIVTLLKDDREEFNATARNNRTQGRSFFIDDPNPAEGCNK
PTFKTIAFTTLELFKFTIGMGDLEFTEKYEYKHVFYVLLITYIVLTYILLLNMLIALMSK
TVEKMSKESTGIWKLQRAITILDLERYAFCLKNKLRSGVRRNLGKSQDDWRWCLRVEEVN
WKKWNRNLGIISEDPGECNTVMKTGSQREPSRRGFLREISRRRPNTRMDPSRQETEPLAS
SPV
NT seq 2352 nt   +upstreamnt  +downstreamnt
atggaacccttttctttggacacagatgacaggtcggatgaggagaggactaagaccaaa
gcaaataaaaaggatcgtcaagcgtatggaaaggccaaagcaccaatggatactgaactt
gcagaggatcatggtgattttgcttgccaagtccgaatcaacctgaacttttctgatgaa
atacaagggataaaagccgaaccagatcagcacgagaggtttgacattaagaggcttttt
gatgccgtgtccaagggtgacgtcaataggctggtgagcctggaggagtatctgattaaa
acaaataagaagctgacaaacaatgaatatcggcccaatgggaagacagccctgatgaag
gctctgctaaacctgaaaaatggagataacaaagcagtggaacacttgctgggtatcgca
gagagaatgggacatctggataagctagtgaacgcagcatatacagatccctactatgaa
ggacagacagctcttcatatagccattgagaggaggaacaagcgttatgttgagctgctc
attcagaaaggggctaatgtccatgcaaaggcttgtgggacattcttccaaccacttgat
gaagcatgtttttactttggggagcttcctctttctctggcagcgtgtactaatcagaaa
gacatagtggaccttctgatggataaagcagacgtgaggtgtacggacactctgggcaac
acggttcttcatgcgcttatgatggtggctgataacagccctgaaaatacagacttcgtc
atttccatgtacgactacattcttaccaaagacgccgctaagaatcccaaagaaaagaag
ctggaggacattgagaacaatcagggacttacttccatcaagctggctgcgaagctagga
aggattgggttgtttgaacacattctgcatcgcgagttccagcaagaagagtgcagacat
ctgtcccgaaagttcacagagtgggcgtatggcccggtgtacgcttcactatatgacctg
gactctgtggactcctacgagccaaactctgtcctggagatagttgtttatggcacagaa
atacctaatcgtctcgagatgctccaaactgagccacttaataaactgctggaagacaaa
tggaacagatacgcccaccggatattcctcttcaagtttattgtttatatcatatacctc
atcatcttcacaactgtgtcttattaccgtgaagaaggaacggatgaaaaacgaccccca
tttccaattaggatttatactccgaaaaacgttgagagaaagattccagatggctactta
ctgtttgccggacaggtcatcatggctatcggatcactctacttcttcatcagtgtgctg
atgaatataaagagaaagcggccaagtctgaaaacactgctggtagacgggtattctgag
ctgctttttttattgcaggctgtattctttatcatctgtgcggggctgtattgcggcggg
atggacgagtatcttgccttcctggtgctcagtgtggctctgtgctgggttaatgtgctc
tacttttctagaggaacccgacacatgggcatctacagcgttatgattcagaagatgatt
cttagcgacatcttgcgcttcctcttcgtatacgtggtctttctctttggattttcagca
gctatcgtgactctactcaaagatgaccgtgaagagtttaatgcaacagcccggaataac
cgcacgcaggggcggtctttttttatagacgatccgaacccagctgaaggctgcaacaaa
cccacctttaaaaccatcgccttcaccactctggagctgtttaagttcactataggcatg
ggcgacctggagttcacggagaagtacgagtataaacacgtattttatgtgctacttata
acctacattgtgctcacgtacattctgctgctgaacatgctgattgctctgatgagcaag
actgtggagaagatgtccaaggaaagcaccggtatctggaaactacagcgtgccatcacc
atattggatctggagagatacgcattctgtctgaagaacaagttgcgctcaggagtaagg
aggaacctgggcaaaagtcaggacgactggcgctggtgtctcagagtggaagaagtcaac
tggaaaaaatggaaccgcaacctgggcatcatcagcgaggatcctggagaatgcaacaca
gtgatgaagactggatctcaaagagagcccagccggcgtgggttcctacgtgaaatcagc
cgacggaggcccaacactcgtatggacccgtcacggcaggagacagaacccctggcatct
agtccagtgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (41)   

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