KEGG   Ictalurus punctatus (channel catfish): 108260475
Entry
108260475         CDS       T04658                                 
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54
  KO
K15326  tRNA-splicing endonuclease subunit Sen54
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ipu03016]
    108260475
Transfer RNA biogenesis [BR:ipu03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing endonuclease complex
    108260475
SSDB
Motif
Pfam: tRNA_int_end_N2 tRNA_int_endo_N
Other DBs
NCBI-GeneID: 108260475
NCBI-ProteinID: XP_017316300
Ensembl: ENSIPUG00000000590
UniProt: A0A2D0QG03
Position
2:13446188..13479146
AA seq 496 aa
MAATDIQPEPVQIDFTKELLSSSELFQRRSRSHKIPVRGQKEFLPNYSVQQKACLQKTLD
EHWMLMTEERLERAGNLVNAEWIPEEKIVKLQSPAGKFWQTMGFSDQGKQCLFPEEALYL
MECGSLQVFYQDLPLSIQEGYETFLSAETVTFLQYQVFGHLKRLGYVVNRFDARPSKQLK
RKWSRSPSFRLCAKKSTASPEVSAGQHKGEIKTSVPYSNLETPGQLQRQQTFQDDALKSD
PESDRAPERNWWTNVSRQLQPDSLQTSEHCWDFSCIFFPDLGSYSGNRACLPPPDPSLLP
GALQVSECHLAHWHRNIHLKEECWSKQKWQRDQERNRCSINDDQEVCRCRNWVEYLELLE
KRRSQQHNERPTHLGEQEVMPLAQPGKCSSHRELLEQVSIIQSYDLLVGNSRLPGSDHWR
ITFNVYQPDTEFKKSYPGKPYTHLCVCSFDGPVPDLHALKELSFQSGDVSVTFAVVDHGD
ISFYCFKEFKLPTDVY
NT seq 1491 nt   +upstreamnt  +downstreamnt
atggctgcgaccgatattcaaccggaacctgttcagatagattttactaaagaattgctg
agttcatcagaactatttcaaagacggagtcgaagtcataagattcctgtgaggggacaa
aaagaatttttgccaaattactctgtgcagcaaaaggcatgtctgcagaagacccttgac
gagcactggatgcttatgacagaggaacgattggaacgagctgggaaccttgtgaatgcg
gaatggatccctgaggaaaagatagtgaaactgcagtctccagcaggaaaattttggcag
acaatgggattttctgatcaaggaaagcagtgcttgtttccagaggaggctctttatctc
atggaatgtggcagtctgcaagtgttctaccaggatcttcctctctccatccaggagggt
tatgaaactttcctttctgctgaaactgtgactttccttcagtaccaggtgtttggtcat
ttaaagagactgggatatgtggtaaatcgatttgatgctagaccaagcaagcagctgaag
aggaaatggagccggagtcccagttttagattgtgtgctaagaaaagtactgcatctcca
gaggtatctgcaggacagcataaaggtgaaattaagaccagtgtcccatacagcaacttg
gaaactccaggccaactacaaagacaacagacctttcaggatgatgcattaaaatctgat
ccagaatcagacagagctccagagaggaactggtggacaaatgtatcaagacaactccag
cctgattcactccagacttcggagcattgctgggatttcagctgcatcttttttccagac
ctggggtcatatagtggcaaccgtgcctgccttccccctcctgatcccagcttgctccct
ggtgctctgcaggtatctgagtgccacctggctcactggcacagaaatatccatttgaag
gaggaatgttggtccaagcaaaagtggcagagggaccaagaacgaaacagatgcagcatt
aatgatgaccaagaggtgtgtcggtgcaggaactgggttgaatatttagaactattggag
aaaaggaggagccagcagcacaacgaaaggcccacacaccttggggaacaggaggttatg
cctcttgctcagcccggaaagtgtagttcacatcgtgagctcctggagcaagtcagcatt
attcagtcttatgatttgctggtaggaaactccaggttacctggctcagaccattggagg
atcactttcaatgtataccagcctgacacagagtttaagaagagttatccaggaaagccc
tatacccacttgtgtgtttgcagtttcgatggtccggtgccagacttgcatgctttgaag
gagctgtccttccaaagtggagatgtttccgtgacattcgcagtggtggaccatggggac
atttccttctactgcttcaaggagtttaagctgcccactgatgtctactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (37)   

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