KEGG   Ictalurus punctatus (channel catfish): 108262825
Entry
108262825         CDS       T04658                                 
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi
  KO
K05189  gamma-aminobutyric acid receptor subunit pi
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04080  Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    108262825
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ipu04040]
    108262825
Ion channels [BR:ipu04040]
 Ligand-gated channels
  GABA-A
   108262825
SSDB
Motif
Pfam: Neur_chan_LBD Neur_chan_memb
Other DBs
NCBI-GeneID: 108262825
NCBI-ProteinID: XP_017318662
Ensembl: ENSIPUG00000018998
UniProt: A0A2D0QK10
Position
3:24498923..24559922
AA seq 456 aa
MRPSCFILFAFILFSSILEEPLLSAEVKEGEILPPTIQKLMKGYNKYLRPFFDDGPVTVG
MSLDIASIDKISEINMDYTATIFLRQRWTDERLVFEGNKSLSLDGRLVELLWVPDTFIVD
SKKSFLHDITVENRLIRIFPNGTVLYALRITTTVACNMDLTKYPMDKQTCTLQLESWGYN
VNDVMFYWVRGNDSVSGLDTLRLAQYTVEDHYTSASEAVYETGNYPKLIFHFELKRSILY
FILETYVPSSLLVVLSWVSFWISQSSVPARICIGVTTVLTMTTLMMGARTSLPNANCFIK
AIDVYLGICFSFIFGALIEYAVAHFCTLQHPEYNSAFTHMQDCEEEINGIVTTIASDSSR
AKRRKDTPTPAPTSTPSGEPDLMAQTPSHLEPMTPEALEDPLNRCIRILSLIRQMLRSVN
CCHVENPHYIDNYSRVTFPLSFVVVNLLYWTYYLYF
NT seq 1371 nt   +upstreamnt  +downstreamnt
atgaggccttcctgtttcattctgtttgccttcatcctcttcagcagcatcctggaggag
ccactgctgagtgctgaggtgaaggagggagaaattctgcctcccaccattcagaagctg
atgaaaggatacaacaagtacctaaggcctttctttgatgatggccctgtcactgtgggg
atgagtttggacattgctagcattgacaagatatcagagatcaacatggactacactgcc
accatcttcctgcggcagcgctggacagatgagaggctggtgtttgaaggtaataagagc
ttgagtctggatgggcgtctggtagagctactctgggttcctgataccttcattgtggat
tccaagaagtccttcctgcatgatatcacagtggagaaccgtctgatccgaatctttccc
aatggaacggtgctttacgctctccggatcaccaccactgtggcctgcaacatggacctg
actaaataccccatggataaacagacatgcaccctacaactggaaagctggggttataat
gtcaacgatgtgatgttttactgggtgagaggcaacgactcagtcagtgggttggatact
ctgcgtctggcacagtacacagtagaggatcattacacttctgcctctgaggctgtgtat
gagacaggtaattatcctaaactcatattccattttgagctgaagcgaagcattctgtac
ttcatcctggaaacctacgtgccctccagtctgctagtcgtgctctcctgggtgtccttc
tggatcagccagtcatccgtgcctgctcgcatatgtataggagtaacgacagtgttaacg
atgaccactctgatgatgggtgcgaggacatctctacccaacgctaactgcttcatcaag
gcaatagacgtgtatttgggaatttgtttcagtttcatctttggagcactgatagagtat
gctgttgctcacttctgcacactccagcacccagagtacaacagtgcgtttacgcacatg
caggactgtgaagaagagatcaatggcattgtcacaaccattgccagtgattccagccga
gcaaagcgacgtaaagacactccaacccctgctccaacatcgactcctagcggagagcct
gatctcatggcccaaaccccttctcacctagagcctatgaccccggaggccctggaggat
cctcttaaccgctgcatcagaatcctgtcactcataagacagatgcttcgctctgtgaac
tgctgtcatgtggagaatccacattacatagacaactactcccgtgtaacatttcccctc
tcgtttgtcgtagttaatctgctctactggacttactatctgtacttttag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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