KEGG   Ictalurus punctatus (channel catfish): 108263788
Entry
108263788         CDS       T04658                                 
Name
(RefSeq) zinc finger protein 883
  KO
K20796  [histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:2.1.1.354]
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu00310  Lysine degradation
ipu01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    108263788
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ipu03000]
    108263788
   03036 Chromosome and associated proteins [BR:ipu03036]
    108263788
Enzymes [BR:ipu01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.354  [histone H3]-lysine4 N-trimethyltransferase
     108263788
Transcription factors [BR:ipu03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 PRDM
    108263788
Chromosome and associated proteins [BR:ipu03036]
 Eukaryotic type
  Meiosis-specific proteins
   DSB formation-related proteins
    108263788
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     108263788
SSDB
Motif
Pfam: zf-H2C2_2 zf-C2H2 PRDM2_PR zf-C2H2_4 zf-C2H2_jaz zf-C2H2_6 SET Zn-ribbon_8 zf_UBZ zf-C2H2_11 zf_PR_Knuckle Zap1_zf1 zf-met Zn_ribbon_SprT C1_1 zf-C2HC_2
Other DBs
NCBI-GeneID: 108263788
NCBI-ProteinID: XP_053535934
UniProt: A0A9F7TG27
Position
3:complement(37624545..37641281)
AA seq 516 aa
MKTEAKDGGTEGIVKKETLELSISNHGNSFHIIPEVVSIKEEEADVKDFLYCEVCKSVFF
SKCEVHGPALFIADSPVPMGVADRARQTLPPGLEIQKSGIPDAGLGVFNKGETVPVGAHF
GPYQGELVDKEEAMNSVYSWVIYMSRQCEKYIDAKREVHANWMRYVNCAHSDGEQNLVAF
QYRGGILYRCCRPINPGQELLVWYEEKYASDVGPIFAQLWNIKCSLSGEKLYHCSECGKS
FTDQINLQQHQRVHTGENPYHCSECGKSFSKQSHFQRHQRVHTGEKPYPCSQCGKSFTNQ
SSVQRHQRIHTGEKPYHCTQCGKSFSQQSHFQRHQRIHTGEKPYPCSQCGKSFSQQSHFQ
QHQRVHTGEKPYHCTQCGKSFTQQDNLQLHQRIHTGEKPYHCSQCGKRFSHQSNLQRHQR
IHTGERPHHCSHCGKSFIQKNELQLHQRIHTGEKPYHCSECGKSFSHKDYLKQHHHIHTG
RKPYLCSLCGKSFIQKGALQRHQRIHTGEKPYHCSQ
NT seq 1551 nt   +upstreamnt  +downstreamnt
atgaaaacagaggctaaagatggaggaacagaaggcattgtgaagaaagagacactggaa
ttgagcatcagtaaccatggaaacagcttccacatcatacctgaagttgtctccattaaa
gaggaagaagctgatgttaaagacttcctctattgtgaggtttgcaaatccgtcttcttt
agtaaatgtgaggtccatggtccggcgctgttcatcgctgatagtcctgttcccatgggg
gttgctgaccgagccagacaaactcttcctcctgggctggagattcagaagtccggtatt
cctgacgcaggcctgggagtgtttaataagggggagactgttccagtaggtgcacatttt
ggaccctaccagggagagctggtagacaaagaggaagccatgaacagtgtctactcttgg
gtgatatacatgagtcggcagtgtgaaaaatacatagatgctaagagagaggtgcatgct
aactggatgaggtatgtgaattgtgctcatagtgatggcgagcaaaatcttgtggcgttt
cagtatcgaggagggattctgtaccgttgctgtcgacccattaatccaggacaagagctc
ttggtgtggtatgaagagaaatatgccagtgatgtaggccctatatttgcccagctctgg
aatataaagtgctctctcagtggagagaagctgtatcactgctcagagtgtggaaagagt
tttactgatcagattaatctccaacaacaccagcgcgttcacacaggagagaacccatat
cactgctcagagtgtggaaagagtttctctaaacagagtcatttccagcgacaccagcgc
gttcacacaggagagaaaccatatccctgctcacagtgtggaaagagttttactaatcag
agttctgtacagcgacaccagcgcattcacacaggagagaaaccatatcactgtacacag
tgcggaaagagtttctcccaacagagtcatttccagcgacaccagcgcattcatacagga
gagaaaccgtatccatgctcacagtgtggaaagagtttctcccaacagagtcatttccag
caacaccagcgcgttcacacaggagagaaaccttatcactgcacacagtgtggaaagagt
tttactcagcaggataatcttcaactacaccagcgcattcacacaggagaaaagccgtat
cactgctcacagtgtggaaaaaggtttagtcatcagagtaatcttcaacgacaccagcgt
attcacacaggagagaggccacatcactgctcgcactgtgggaagagttttattcaaaaa
aatgaacttcaattacaccagcgcatccatacaggagagaaaccgtatcactgctcggag
tgtgggaagagtttctctcacaaagattatctcaaacaacaccatcacattcacacagga
aggaagccgtatttgtgctcactgtgtggaaagagttttattcagaagggtgcgcttcaa
cgacatcagcgtatacacacaggagagaagccgtatcactgttcacagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (16)   
   Pfam (16)   
All databases (67)   

Download RDF
DBGET integrated database retrieval system