KEGG   Ictalurus punctatus (channel catfish): 108264410
Entry
108264410         CDS       T04658                                 
Name
(RefSeq) nuclear pore complex protein Nup93
  KO
K14309  nuclear pore complex protein Nup93
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    108264410
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ipu03019]
    108264410
Messenger RNA biogenesis [BR:ipu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     108264410
SSDB
Motif
Pfam: Nic96 TarH Clathrin Nup84_Nup100
Other DBs
NCBI-GeneID: 108264410
NCBI-ProteinID: XP_017321395
Ensembl: ENSIPUG00000019319
UniProt: A0A2D0QV79
Position
4:11922533..11953987
AA seq 820 aa
MDAEGFGELLQQAEQLAAETEAVSELPHVERNLQEIQQAGERLRSRTLTRTSQDTADVKA
SILLGSRGLDIFHISQRLESLSAATTFEPLEPVKDADIQGFLKNERDNALLSAIEESRRR
TFLLAEEYHRESMLVQWEQVKQRVLHTLLGAGEDALDFSQDLEPSFISDMGAPGRSALDS
VEVAYGRQIYVFNEKIVNGHVQPNLGDLCASVADSLDDKNVSDMWLMVKQMTDVLLVPAK
DTLKSRVSVEMQMAFVRQALTFLENSYKKYTMVTVFGNLHQAQLGGVPGTYQLVHSFLNI
KLPGPLPSMQDGEVEGHPVWALIYYCLRCGDLAAAMQVVNRAQHQLGDFKTWFQEYMNSP
DRRLAPATENKVRLHYRRVLRNSADPYKRAVYCIIGKCDIADNHGEVADKTEDYLWLKLN
QVCFDEDGSSAPQDRLTLAQLQKQLLEDYGESHFSASQQPFLYFQVLFLTAQFEAAVAFL
FRMERLRSHAVHVALALYELKLLLKSSGQSAQLLSQEPGDPPMVRRLNFIRLLMLYTRKF
EATDPREALQYFYFLRNEKDSQGENMFMRCVSELVIESREFDMLLGRLEKDGSRKPGVID
KFAGDTRAIITKVASEAENKGLFEEAVKLYELAKNPDKVLELMNKLLSPVIAQVSAPQSN
KERLKNMALGIAERYRTNGIGGEKCVDSTFYLLLDLMTFFDEYHAGHIDRAYEVMEKLKL
VPLSQDQVEERVAAFRNFSDEVRHNLSEVLLATMNILFTQYKRLKGVTAGTPGRQQRTLE
DRDSILRSQARALITFAGMIPYRMAGDTNARLVQMEVLMN
NT seq 2463 nt   +upstreamnt  +downstreamnt
atggatgccgagggctttggggaactgctgcagcaggccgagcagctggcagcagagacc
gaggccgtgtccgagctgcctcacgtcgaacgcaatcttcaggagatccagcaggctgga
gaaaggctgcgctctcgcaccctcacaaggacctcacaggacacggccgatgtcaaagcc
tcaattctcctgggctctagaggactggacatctttcacatctcccagcgcctggagagc
ctgagtgcagcaacgaccttcgagccactggaaccagtgaaagacgcagacattcagggc
tttctgaagaacgagcgagacaatgcacttctgtccgctattgaggagtctcgccgcagg
actttcctgctggcggaggaatatcatcgcgagtccatgttggtgcagtgggagcaggtg
aagcagagagtgctgcacaccctactgggagcaggcgaggatgcactggacttcagccag
gatctggagccaagttttataagtgacatgggagctcctggacgcagcgctctggacagt
gtggaggtggcttacgggcgacagatctatgttttcaatgagaagattgtaaatggacac
gttcagcccaacctgggggacttgtgtgcatcggtagctgacagtctggatgataagaat
gtatctgacatgtggctgatggtgaagcagatgacggatgtgctgttggtgccagccaaa
gacacactgaaaagtcgcgtctcggtggagatgcagatggcttttgtccgacaggccctg
actttcctggagaacagctataagaaatacaccatggtgactgtgtttgggaacctgcac
caggctcagttaggtggagtacctggcacttatcagcttgtgcacagcttcctcaacatc
aagcttcccggcccactgccaagcatgcaggatggtgaggtggagggccatccggtgtgg
gctctgatctattactgcctgcgatgtggagacctggctgcagctatgcaggtggtgaac
cgtgcacagcaccagctgggagactttaagacctggttccaggagtatatgaacagccct
gaccgccgcctggcgccagctacagagaataaagtgcgactgcattaccggcgcgtgttg
cgcaatagcgccgatccatacaagcgtgccgtctactgcattatcggcaagtgtgacatc
gccgacaaccacggagaggtggctgataaaacagaagactacctgtggctcaagctgaac
caggtgtgttttgacgaagatggaagcagcgctccacaggacagacttactctggcccag
ttacagaaacagctcctggaggactatggcgagtctcatttctcagccagtcagcagcca
ttcctatacttccaggtgctttttctgaccgcgcagtttgaggcagcggtagcgttcctc
ttccgcatggagcgtctgcgcagtcacgccgtgcacgttgccctcgccctctacgaactt
aaactacttctcaaatcatcaggacagagcgcacagctattgagtcaggaaccaggagat
ccccccatggtacggcgactaaacttcatccgcctgcttatgctctacactcgtaaattt
gaggccacagacccacgagaggctctgcagtacttctacttcctgcggaacgagaaagac
agccaaggagagaacatgttcatgcgctgcgtcagtgagctggtcattgagagtcgtgag
tttgacatgcttctgggaaggctagaaaaagatggaagtagaaagcctggtgtgattgac
aagtttgccggagacacgcgagccatcatcaccaaagtggcctcagaggccgagaacaag
ggcctgtttgaggaagctgtcaaactctatgagttagccaagaaccctgataaagtgctg
gaattgatgaataagttgctgagtccagtaattgcccaggtcagcgcgccacagtcaaac
aaagagagactcaagaacatggcactgggtatcgctgaacggtaccgcactaatggtatc
ggtggagagaagtgtgtggatagtaccttttacttactcctggacctcatgaccttcttc
gatgaataccacgccggccacatcgaccgtgcatacgaagtaatggagaagctaaagctg
gttcctttgagccaagaccaagtagaggagagggtagcagcattcaggaacttcagcgat
gaggtcagacacaatttatccgaagtgcttcttgccactatgaacatcctgttcacacag
tacaagcgcctgaagggtgtgacagcgggaactccgggcagacagcagcgcacattggag
gaccgagactcgatcctgcgcagccaggcccgggcactgatcacgtttgctgggatgatc
ccataccgcatggctggagacaccaatgccaggctggtacagatggaagtcctgatgaac
tga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

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