KEGG   Ictalurus punctatus (channel catfish): 108266052
Entry
108266052         CDS       T04658                                 
Symbol
prdm2a
Name
(RefSeq) PR domain zinc finger protein 2
  KO
K11432  [histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:2.1.1.355]
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu00310  Lysine degradation
ipu01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    108266052 (prdm2a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ipu03000]
    108266052 (prdm2a)
   03036 Chromosome and associated proteins [BR:ipu03036]
    108266052 (prdm2a)
Enzymes [BR:ipu01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.355  [histone H3]-lysine9 N-trimethyltransferase
     108266052 (prdm2a)
Transcription factors [BR:ipu03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 PRDM
    108266052 (prdm2a)
Chromosome and associated proteins [BR:ipu03036]
 Eukaryotic type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     108266052 (prdm2a)
SSDB
Motif
Pfam: zf-C2H2_4 zf-C2H2 zf-C2H2_6 PknG_rubred zf-C2HE Rpr2 zf-H2C2_2 zf-C2H2_jaz
Other DBs
NCBI-GeneID: 108266052
NCBI-ProteinID: XP_017324502
Ensembl: ENSIPUG00000001052
UniProt: A0A2D0R1I4
Position
5:24657064..24665874
AA seq 1546 aa
MGDSENVKAEELLVSSEKQQQYVILHCPADSHQHSLTGESPPIHDSLKEKEREPEGGTDD
IMEQSEEDQNIFPAQRTGKPTMEPVPLQTIDLINQNITCKAGETELLEMLKQDNKSADAD
LDPDYDPKINPDGNHKSSCMFFCQHCQRRFTTKQGLERHMHALSSCHTQIFKCRYCRKCF
STQFCRRRHERRHSNTNRRAGGLIISPAPQVVVETQGMVSSQEEDQLALTAQPVSNSPVP
DVEGRGDVDEFGETKCSFACKYCKKAFGTHTSLRRHERRIHERRLLPRGVRQKVVNSHEV
QIQHSVGPPETSSNTQRNDAVRQEEEYMVDISSNISENLSFYIDGKIISTSAVTNCEVME
LNSAAAVIGLDAFIVNPAQITQALKIDSNDCNMTSDLSGQSSGKRRTSTPPLLPQIKTEL
ESESILTTPSAASEGTLIGTVFPRTLETIVLQKEKTIYLSPKLKQLLQNQDSSKSSFSLI
SEGQKLCPPLSLTLLPATSSRFKRRTTSPPISPQQSSPPMLKSTVVQETDSSAPKVPKID
SHCTSAVMSLSKNGEIETVNPATNHPAETIQESLLLDCSASGTGGRSCNQQPLDLSSAVG
KRDSEVLADCVLDLSMGKKSTESDSTGCLAFQTSVRRTKPNSSMLEKVLLSQYAVVDVPT
PADEPDNAPLETDLAAMAVSEPIPANPESVMSELPPPSPPALDATPPLPNSAALHTASPA
QPLSATSEPTEILLPAQTSITNQELQPICSTAQSSSTAALNTPVELSVGNSLAAFNVSLP
NWLNSAPGSVTHALIPTTPALSLQGPQYLTDTSVCELAQRTLVIDSVLSPETHLISPVLV
NQSNISSLSFSPNVVVIEYTVALESSNPTPVPQANAVHSLFDKTPPDHIEAQELQPSSQL
QAANIEPSVSELPEAGIVEAQDQVLDTSSNGESLENSVAAVLPSLGPSVSEKVETTVEPA
ENSSSTDLLKVETSDITIQQNLMTEEQLPLPPLCKRFMCNACDELFHSMKGLSQHIGEHS
GTWPYKCEFCVQLFESDTGLFEHRSSYHGIGKIYVCRICSKEFAFLCNLEQHHRDLHPGQ
ECSHTEVENGKLRPENHNCPVRADTFTTACPRKEKLSQSYQTIPKPEADSKSENTTEELY
TTIKIMASEGVKPKGTDVRLGINQHYPSFKPPPFPYHNRTPVGPVTTTATNFTTHNIPQT
FSTTVRCTKCGRGFDNMPELHKHILACANASDKKRYTPKKNPIPLKQFAKVQNGVLLPAR
GVNLRQNISQKLGQPKKLHFHEAEAKTKLSAHSKRKSMWVQRGRPVGRKSSQEELVVYIC
PHCSREFTYHASLKKHMAFSCPMKPICRKPPKRKGSIAPTQENHGRIRTRVSDVIMKPQR
LNQGQKSLAKTQTNETGSASNVNLPVKAQIGKGKITVRNYRPKTSYILSGSAVHISKKNR
LILMEATQSPLASKSLVATGKSQLQSNGVHGMERKIKQRDVELKPSTEEQFSLRLRGPVT
RSLQQVTSNVTSNTNKKANSTNPAKCLVQTDDQNVAEHQAVAESKK
NT seq 4641 nt   +upstreamnt  +downstreamnt
atgggtgattctgagaacgtgaaggcagaggagctgctcgtttcgtcagagaagcagcag
cagtatgtaattctgcactgccccgctgatagtcatcagcattctctgactggggaatct
ccccctatacatgactcactgaaggagaaagagagagagccagagggagggactgatgac
atcatggagcagtctgaggaggaccaaaacatctttccagcacagaggaccggtaaacca
accatggaaccagtacccttgcaaaccattgacttaataaatcaaaatataacctgtaag
gcgggtgagactgaactcttggaaatgctcaaacaggacaataaatcagcagatgctgac
ctggacccagactatgaccccaagattaaccctgatggcaaccataagagttcatgcatg
ttcttctgtcagcactgtcaaagacggtttactaccaagcaaggcctggaacggcacatg
catgccttgtcatcctgccacacacagatatttaaatgccgctactgcagaaagtgcttc
agtacacagttctgccgacgtcgacatgagagaagacatagtaacaccaatagaagggca
ggtggtctcataattagccctgctccacaggttgtcgtagagactcagggaatggtctct
tcacaagaggaagaccagcttgccctgactgcccagccagtcagcaattctcctgtgcct
gatgtggaaggaagaggtgacgtggatgaatttggagagactaaatgctcttttgcctgt
aagtactgcaagaaagcatttggaactcacaccagcttgcgaaggcatgagcgcaggata
catgaacgtcgtctattgcccagaggagtccgtcagaaagttgtaaactctcatgaggtt
caaattcagcattctgttggtccgccagaaacctcttccaatacacaacgcaatgatgca
gtcaggcaagaagaggagtatatggtcgatatttccagcaacatctctgagaacctcagc
ttctacattgatgggaaaatcatctccaccagtgctgtcactaattgtgaagtgatggag
ctgaattctgctgctgctgtgattggtctggatgcctttatagtcaacccagctcaaatt
acacaggcccttaaaatagattctaatgactgcaacatgacctctgacctcagtggtcaa
tcctctggcaaaaggaggacatctaccccacctttactgccacaaattaaaactgaactg
gagtcagaatctatcttaacaacaccttctgctgcttcagaaggtacattgattggcact
gttttcccccggacattagagaccattgttttacagaaggagaaaactatttatctgtct
cccaagctaaagcagcttctacagaaccaggatagcagtaagtcatcattttctctgatc
agtgaaggccaaaaactctgcccacctttatcactaacacttttacctgcaacaagtagc
aggtttaagagaaggacaacatcccctcctatctccccacagcaaagcagtccaccaatg
ctgaaatctactgttgtacaggaaactgattcttctgcacctaaagtgccaaagatagac
agtcactgcacatctgctgttatgagcttatctaaaaatggagaaatagaaactgtaaat
ccagctacaaatcatccagctgaaaccattcaggaaagtctgctattggattgctctgca
tcggggactggtggcaggtcatgtaatcagcagccactagatctctccagtgctgttggt
aagagagacagtgaggtcttagctgactgtgttctggatctgagcatgggcaaaaagagt
acagagtctgactcaactggatgtttagccttccagacatcagtcaggaggactaaaccc
aattcgagcatgttggagaaagtattgctaagccagtatgctgtagtggatgttcctaca
ccagcagatgaacctgacaatgctcctttagaaacagatttagcagcaatggctgtgtct
gagccaattcctgctaaccctgaaagtgttatgtctgagctgcctccaccctctcctcct
gcactggatgcaacccctcctctgccaaattctgctgcactgcatactgcctctccagcc
cagcctctttcagctacttcagagcccacagagatattactaccagcgcaaacatccata
accaatcaagagcttcaacctatctgctccactgctcagtcctccagtactgcagcgctc
aacactcctgtggagctctcagtcggaaattcgttggcagcttttaatgtgtctcttccc
aattggcttaattccgcccctggaagtgtgacccatgcgctcatccccacaaccccagct
ctaagcttacaaggtcctcagtatcttacagatacatctgtgtgtgaactagcacaaagg
accttggtgattgattccgtcttgtcacctgaaacacatctaatttctcctgtgttggtg
aaccagtcaaacatcagttccctgagtttttctccaaatgtggttgttattgagtatact
gttgcactggagtcctctaatcccacccctgttccccaagctaatgctgttcactcgctc
tttgataaaacaccaccagatcacattgaagcacaagaactccagccttcatctcaacta
caggctgccaacatcgagccatcagtttcagaactgccagaggctggcattgttgaggct
caagatcaagtattggacacatcctctaatggagaatcattagagaattcagtagctgca
gtactgccatcacttggtcccagtgtttcagagaaagtagagacaacagtggagcctgca
gaaaattcatcctctactgatcttctcaaagtggaaacctcagacattaccatacagcag
aatcttatgactgaggagcaattgcccttgcctcctctatgcaagcgctttatgtgtaat
gcctgtgatgagctcttccattccatgaagggtctgagtcagcatattggtgaacactca
ggcacttggccatataagtgtgaattttgtgtccagctatttgagagtgacactggttta
tttgagcaccgatccagttaccatggcattggtaaaatctatgtctgcagaatatgctcc
aaagagtttgcttttctttgcaacctagagcaacatcatcgagatctccatcctgggcag
gagtgctcacatactgaagtagaaaatggtaagttaagacctgaaaaccataactgtcca
gtaagagctgatacttttactacagcatgtcctagaaaagaaaaacttagccagtcctac
caaacaattccaaaaccagaggctgacagtaaatctgaaaacactactgaggagttatac
actaccatcaagattatggcatctgaaggtgtcaaacccaaaggtacagatgtgcggctt
ggcattaaccagcattacccaagttttaaaccacctccatttccatatcacaaccgaaca
ccagttggaccagtcaccaccacagccactaacttcaccactcataatatcccacagact
ttcagcactacagttcgctgcaccaagtgtggcaggggctttgacaacatgcccgaacta
cacaagcacatattagcctgtgctaatgctagcgacaaaaaacgctacactccgaaaaag
aaccccattccactcaagcaatttgcaaaagtgcaaaatggagttctgttgcctgctaga
ggagtcaaccttagacagaatatctctcaaaagcttggacaaccaaaaaagctccatttc
catgaggcagaagctaagacaaagctgagcgctcatagtaagaggaaatctatgtgggta
caaagagggaggccagtagggcgaaagagttcacaggaggagctggtggtttatatttgt
cctcattgtagcagggagttcacttaccatgccagcctgaagaagcatatggctttcagc
tgcccaatgaaaccgatttgcaggaaacctccaaaaagaaaaggtagcattgcaccaacg
caggaaaaccatggacgtatccgcacacgtgtatcagatgtaataatgaaaccacaaagg
ttaaatcaaggacagaaatccttagcaaaaacacagaccaatgagactggttcagccagc
aatgtgaatctaccagtcaaggctcaaattggcaaagggaaaattactgtgcgcaattat
aggcctaaaacatcttatattctctcaggctcggcagttcacataagtaaaaaaaataga
ctcattctgatggaagccactcagtcaccattggcatcaaaatctttagtagcaacaggg
aaatctcagctgcagagcaatggggtacatggtatggagaggaaaataaagcaaagagat
gtggagttgaagcccagcacagaggagcagttctctctgcgattgagaggtcccgttacc
cgcagtctacagcaggttacatctaatgtcacatctaatactaacaaaaaggctaactca
actaatccagccaaatgtttagtccagacagatgatcagaatgttgctgaacatcaagca
gttgcagagtcaaagaaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (62)   
   KEGG ORTHOLOGY (1)   
   RefGene (57)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (92)   

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