KEGG   Ictalurus punctatus (channel catfish): 108266900
Entry
108266900         CDS       T04658                                 
Name
(RefSeq) glycine receptor subunit alpha-2
  KO
K05194  glycine receptor alpha-2
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04080  Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    108266900
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ipu04040]
    108266900
Ion channels [BR:ipu04040]
 Ligand-gated channels
  Glycine
   108266900
SSDB
Motif
Pfam: Neur_chan_LBD Neur_chan_memb
Other DBs
NCBI-GeneID: 108266900
NCBI-ProteinID: XP_017326215
Ensembl: ENSIPUG00000015410
UniProt: A0A2D0R8R7
Position
6:563055..575964
AA seq 442 aa
MTRALFQVLTALLACALEMHQLRVIAAKENDRRGSSLTMSPSDFLDKLMGKTSGYDARIR
PNFKGPPVNVTCNIFINSFGSITETTMDYRVNIFLRQKWNDPRLAYSEYPDSSLDLDPSM
LDSIWKPDLFFANEKGANFHDVTTENKLLRIFKDGTVLYSIRLTLILSCPMDLKNFPMDV
QTCIMQLESFGYTMNDLIFEWLDTGPVQVAEGLTLPQFIIREEKELGYCTKHYNTGKFTC
IEVKFQLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSG
SRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAGVNFVSRQQKEFLRLKRRQRRNIKEEE
LREGRFHFSGYGIATCMKDGVAVKSDGGVQQTSVENNKRKFVDRAKRIDTISRAAFPLAF
LIFNIFYWITYKIIRHDNTGRV
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgacgcgcgccctgttccaagtgctcacggctctgctggcgtgcgcgctggaaatgcat
cagctcagggtaatcgcagcaaaggagaacgacaggcgtggatcttcgctgactatgtcg
ccatccgatttcctggacaaactgatggggaagacttcaggctacgacgcaaggataaga
ccgaacttcaaaggtcctcctgtaaatgtcacttgcaacattttcatcaacagctttggc
tccatcaccgagaccaccatggactacagagtgaacatcttcctgcgtcagaagtggaac
gacccgcgccttgcctacagcgagtatccagactcctcgttggatttggacccgtccatg
ttggactcgatttggaaacccgacttgttcttcgccaacgagaaaggcgccaatttccac
gacgtcaccaccgagaacaagctgctgaggatcttcaaggatggaactgttctctacagc
atcaggttgacgttaattttgtcctgtccaatggatttgaaaaacttcccgatggacgtc
cagacgtgcataatgcagctggagagctttggctacacgatgaacgatctgatctttgag
tggttggacacggggccggtgcaggttgccgagggtctgacgctgcctcagttcatcatc
agggaggaaaaggagctgggctactgcactaaacactacaacacggggaagttcacctgc
atcgaagtgaagttccagctggagaggcagatgggctactacctgatccagatgtacatc
cccagtctgctcatcgttatcctgtcctgggtgtccttctggatcaacatggacgccgcg
ccggctcgagtcgccctgggcatcaccaccgtgctcaccatgaccacacagagctccggg
tccagagcctcgctgccaaaggtgtcgtatgtaaaggccatagacatctggatggcggtg
tgtttgctgtttgtcttcgctgcgctgttggaatacgccggagtgaattttgtctcgaga
caacagaaggagtttctccgactcaaacggagacagagacgaaacatcaaggaggaggag
ctaagagaaggacgtttccatttctccggctatggcatagctacgtgcatgaaggatggc
gtagcggtgaaaagtgacggcggcgtgcagcagacttcggtggagaacaataagaggaag
tttgtggaccgagcgaagaggatcgacactatttcgagagcagcgtttcctttggccttt
ctcatttttaacatcttctactggatcacgtacaaaataatcagacatgataacaccggc
agagtgtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (2)   
   Pfam (2)   
All databases (40)   

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