KEGG   Ictalurus punctatus (channel catfish): 108268955
Entry
108268955         CDS       T04658                                 
Name
(RefSeq) ras-related protein Rab-13
  KO
K06109  Ras-related protein Rab-13
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04530  Tight junction
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    108268955
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ipu04131]
    108268955
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ipu04147]
    108268955
   04031 GTP-binding proteins [BR:ipu04031]
    108268955
Membrane trafficking [BR:ipu04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab GTPases
    108268955
Exosome [BR:ipu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   108268955
  Exosomal proteins of colorectal cancer cells
   108268955
GTP-binding proteins [BR:ipu04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab8/10/13 [OT]
    108268955
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA SRPRB MMR_HSR1 PduV-EutP RsgA_GTPase Septin AAA_7 AAA TniB AAA_22 FeoB_N AAA_16
Other DBs
NCBI-GeneID: 108268955
NCBI-ProteinID: XP_017329836
Ensembl: ENSIPUG00000003199
UniProt: W5UKR5
Position
1:complement(8257021..8268809)
AA seq 201 aa
MAKKYDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVEGKKVKLQ
VWDTAGQERFKTITTAYYRGAMGIILVYDITDDKSFENIQNWMKSIKENASAGVSRMLLG
NKCDIEAKRKVSKEIGEKLAKDHGIRFFETSAKSSINVEESFIALARDILVKSNTKPGSA
GREVRLTSTAPEKKASKCLML
NT seq 606 nt   +upstreamnt  +downstreamnt
atggcaaagaaatacgacttcctctttaaattgctgcttattggtgatagcggggtggga
aaaacatgtctgatcatccgttttgcagaggataattttaattctacatacatatcaact
atcggtattgactttaaagtgaagaccattgaggttgaagggaagaaagtcaagttacaa
gtctgggacacagcagggcaggagaggtttaagaccatcactacagcttattacagagga
gctatgggtatcatccttgtgtatgacattactgacgacaaatcctttgagaacattcaa
aactggatgaagagtatcaaagagaatgcatcagcaggagtgagtcgaatgctgctgggc
aacaagtgtgacatcgaagccaagagaaaggtgtctaaggagataggcgagaagctcgca
aaggaccatgggattcggttctttgagacaagtgcaaagtcaagcatcaatgttgaggag
tccttcattgctctggctcgagatatcttggtgaaatctaacacaaagccgggctcagct
ggccgtgaagtcagactcacaagcaccgccccagagaaaaaggcatccaagtgtcttatg
ttgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (16)   
   Pfam (16)   
All databases (40)   

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