KEGG   Ictalurus punctatus (channel catfish): 108271299
Entry
108271299         CDS       T04658                                 
Name
(RefSeq) peroxisomal ATPase PEX6
  KO
K13339  peroxin-6
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04146  Peroxisome
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    108271299
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ipu04131]
    108271299
Membrane trafficking [BR:ipu04131]
 Autophagy
  Pexophagy
   Other pexophagy associated proteins
    108271299
SSDB
Motif
Pfam: AAA AAA_lid_3 AAA_16 DUF815 AAA_22 AAA_5 RNA_helicase RuvB_N AAA_7 AAA_33 AAA_28 Rad17 nSTAND3 AAA_18 AAA_14 Mg_chelatase TsaE AAA_25 Vps4_C Parvo_NS1 TIP49 AAA_17 IstB_IS21 bpMoxR AAA_24
Other DBs
NCBI-GeneID: 108271299
NCBI-ProteinID: XP_017334270
Ensembl: ENSIPUG00000002259
UniProt: A0A2D0RWE2
Position
10:11526118..11540683
AA seq 1086 aa
MAAPVKFVCLDQFPPDMHPLQAVVRKLQLTEIFSNSTGTSCALLLSCQETQTSTKSAVLV
CAHITAEEFPDCTVHSNTSTLAVYVSKAFLSHYNFQEETPGIARILQPLPLDKIVIGART
KQSFRWASSEEFSSFLLVLASCPGQTVLVRRGDTLILPHHPLLGDNATLVRQYLSDLVVL
DCTPLTHGMITVNTTVVVSDCRDLLHGHGALDSADSSVTLRPSSVSLFVSDFAHYANNLG
PASSFLSNRLLFSSGFTEVLQALECRLDVQVTCDNAKLCKLANFGRKIGKNAEVDMDSSI
FVSKTLLLKLGLFNGEWVMAALGKVKRCSGPEGAQSPPDNECGAKAMTKTKGDSHLAKIV
AFIKSSDMDVSDNAGFISPVLWFNLSNGEGTPVGSKSLKIKRWNKAPLQPGHKLSASICC
SAAPPYAKELHIDAVMSPDYDSHGPFDNILFKHFSTPRLVQQGSILGIPTQGHLDFLENS
SDEITRWPVLYFKVKQVSGFSEDEAEVGSYLADTDHTSLYMRGSTNSLAPCSISEAGSSF
WMSLLPPGLSDIVEKLVSIIQPHVTERCVNLRRACSVLLMGADGCGKVTAIKAVCRRLHL
HLLKVNCVTLCGDTAAACESKMKAAFHRAELHHPCVLLLRNLQLLGQRRDSTETDSRVAS
ALCQLIADAHSSVILVGCVRAQRDLSSDVMPAFVHQVVMESPTEEQRKAMLASLSQDLPL
GKDVNLAKIAKQTAGFILGDFCALLTGAGKAAHQRLLKSYYPHGASAQEEEDLCVFGVTI
MGVDFTTALEALQEARSQAIGAPKIPSVKWQDVGGLQQVKKEILDTIQLPLEHPELLSLG
LRRSGLLLYGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENIREVFCKART
ASPCIIFFDELDSLAPNRGRSGDSGGVMDRVVSQLLAELDGLHSSSDVFVIGATNRPDLL
DQSLLRPGRFDKLVYVGINEDKESQLQVLKAILRKFKVDPSVSLSEIVERCPLQLTGADL
YALCSDAMMSAVKRRILHITEGLESEDATLTLCANDFNRALDILQPSVSEEELHKYKLIE
QKLTAK
NT seq 3261 nt   +upstreamnt  +downstreamnt
atggcggcgcccgtaaagttcgtctgcctcgatcagtttccacctgatatgcaccccttg
caagcagtcgtccgtaagttacagttaactgaaatattttctaactccactggaacctca
tgcgcgctgttattatcctgtcaggaaactcagacgtccacaaagtcggcagttttagtt
tgcgcccacataacagctgaggagttccctgactgcacggtccatagtaacaccagcact
ctggcagtttatgtgtctaaagcttttctaagtcactacaattttcaggaagaaacgcca
ggaatcgcgcgtatcctacagcctctgcctttggacaagatagtaattggtgctcgcact
aagcagagcttcagatgggcatcttcggaagaattctccagttttctgctagttttggca
tcgtgtcctggacagactgtgttggtgaggagaggtgacactctgattttaccacaccat
cctctgcttggtgataacgccactctggtgcgtcagtatctctctgatttggtcgtgctg
gattgcacacctcttacccatggtatgatcactgtaaacactactgttgtagtctctgat
tgcagggaccttttgcatggccatggtgctttggactctgctgacagcagcgtaaccctc
agaccgtccagtgtgtccttgttcgtctctgatttcgcccactatgcgaacaatcttggc
ccggcgagctcgtttctgagtaaccggcttttgttcagctctggattcacagaggttctt
caagcccttgagtgcaggctggatgtgcaggtcacctgtgacaatgccaagctttgtaag
ttggcaaattttgggaggaaaatagggaagaatgcagaggtggacatggacagctccatt
tttgtgagcaaaaccctattgttaaagctagggttgtttaacggtgaatgggtcatggct
gcattgggaaaagtaaaaagatgttcgggaccagaaggggcacaaagtcctccagacaac
gaatgtggagcaaaggctatgactaagaccaaaggagatagtcatctggctaaaattgtg
gcttttattaagtcttcagacatggacgttagcgataatgcaggtttcatctcaccggta
ctgtggtttaacttgtccaatggagaaggaacacccgttggaagtaaaagcctcaaaata
aagagatggaacaaggcaccgttacagccaggacacaaactgtctgcaagtatatgctgt
tctgctgcaccgccatatgccaaagaactacacattgatgcagttatgtctccagattat
gactcccatgggccctttgacaatattctctttaagcacttcagcacacctcgacttgtc
cagcagggaagcatactgggtattccaacacaaggtcatctggattttttggaaaatagc
tctgatgaaatcacaagatggccagtcttatattttaaagtgaagcaggtgtctggcttt
tctgaggatgaagcagaagtcggatcatatcttgctgatacagaccacacctctctgtat
atgagaggttccaccaatagtctggctccgtgctccatctcagaggcaggttcatcattc
tggatgagtctcttgcctccaggactctctgacattgttgagaaattggtctccatcata
cagccgcacgtcactgaaaggtgtgtaaatttgaggcgagcctgctctgttctcctcatg
ggtgcagatggatgcgggaaggtcacagcgatcaaggcggtttgtcgaaggcttcatcta
cacctgctaaaggtgaactgcgtgaccctgtgtggagacactgcagctgcctgcgagtcc
aagatgaaggccgccttccacagagcggagctccatcacccctgtgtgcttctgctgagg
aacctgcagttacttggccagcggcgagacagcactgaaacagactccagagtagcttct
gcactctgccagctcatagctgatgcccactcaagtgtaatcttggttggctgcgtgcgt
gcccagcgggatttgtcctcagacgttatgccagcctttgtacaccaggttgtgatggag
agtcccacagaggagcagaggaaagccatgctagccagcctcagtcaagacctccctcta
gggaaagatgtcaatctggctaagatcgctaagcagactgcgggtttcattttgggagat
ttctgcgcactactcactggtgctggaaaagcagctcatcagcgcctgctgaagtcttat
tatccacatggggccagtgctcaggaagaggaggacctgtgtgtgtttggtgtgaccatt
atgggtgttgacttcaccacagcgctggaggctctgcaggaggcccggtcacaggcaatc
ggtgcaccaaagatcccatcagtgaagtggcaggatgtgggtggtctgcagcaggtcaag
aaggagatcctggacaccatccagctccctctggagcatccagagctgctctcactaggt
ctgagacgctctggcctgctgctctacggacctccaggcactggcaagactctgctagcc
aaagctgtggctactgagtgttctctaaccttcctcagtgtcaaaggtccagagctcatt
aacatgtatgttgggcagagcgaggaaaacatcagagaagtgttttgcaaagctaggact
gcatctccctgtattatcttcttcgatgagttggactctttggctcctaaccgaggccgc
agcggagactcaggaggggtgatggacagggtcgtgtcgcagctcttagctgagcttgat
ggcttgcattcatctagtgatgtctttgtgattggagcaactaaccggccagacttactc
gaccagtcgcttctcaggcccggcagatttgataaattagtgtacgttggcattaacgaa
gacaaggaatcacagctacaagtgctcaaggctatattacgaaagtttaaggtggatccc
agtgtcagtctgtcggaaatagtggagcgctgtccacttcagctcacaggagccgatcta
tatgcactctgctctgacgccatgatgtctgctgttaagaggaggattttgcacatcact
gaaggtctggagtcagaggatgctacgctcacgctgtgtgccaatgacttcaacagagct
ctggacatcctgcagccatcagtgtctgaggaggagctgcacaagtacaaactcatcgag
cagaaactcactgcaaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (25)   
   Pfam (25)   
All databases (49)   

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