KEGG   Ictalurus punctatus (channel catfish): 108271972
Entry
108271972         CDS       T04658                                 
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4
  KO
K11835  ubiquitin carboxyl-terminal hydrolase 4/11 [EC:3.4.19.12]
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ipu01002]
    108271972
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ipu04121]
    108271972
Enzymes [BR:ipu01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     108271972
Peptidases and inhibitors [BR:ipu01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   108271972
Ubiquitin system [BR:ipu04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    108271972
SSDB
Motif
Pfam: UCH Ubiquitin_3 DUSP UCH_1 USP7_C2 USP7_ICP0_bdg DUF1609
Other DBs
NCBI-GeneID: 108271972
NCBI-ProteinID: XP_017335464
Ensembl: ENSIPUG00000019043
UniProt: A0A2D0RY93
Position
11:12245211..12263984
AA seq 1010 aa
MAEGGGPEPGNAAEPVAEPVPAQTPLPSIDSQKQTIGALLKTTLRKGDEWFLIDSRWFKQ
WKKYVGFDSWDLYNVGEQNLYPGPVDNSGLFSDQETQALKEHLIDELDYVLVPTEAWRNL
VSWYGCLEGQRPIVRKVVEHGMFVKHCKVEVYLLELNLCENDNMDNVVTRHFSKADTIDT
IEKEMRTLFNIPSEKETRLWNKYMSNTYEQLNKPDSTVQDAGLFQGQVLVIESKNEDGTW
PRQASHPKSSTATSRTFTTSPKLSSNSSATISSTVTNGDSSSSSNSSYMLNNSTSGGIRL
GGYSSYSSSYSYREPASQPGLCGLSNLGNTCFMNSALQCLSNSPPLTEYFLEDKYEAEIN
RENPLGMRGEIAEAFADLIKQMWLSRSSYVAPRTFKTQVGRFAPQFSGYQQQDSQELLAF
LLDGLHEDLNRVKKKPYLALRDAEGRPDEIVAKEAWTNHRLRNDSIIVDIFHGLFKSTLV
CPECSKVSVTFDPFCYLTLPLPMKKDRTMEVFLVRNDPQSRPMQFRLVVPKLGIVADLCS
SLAKLSGVPAENMIVADVYNHRFHKIYRKDEGLNHIMEKDDIFIYEVSEEDSERMNLPVY
FRERDVKHSGGSSCTMLFGQPLLITVPRHNLSPDTLYERVLERIGRYVKHSQGTIMESRV
FATATSSSSHSDRGDLASSHNAGLSSCSSPMSNGASSSACSTTGSNHSDTCNGPNGVCDG
EEEAMDHQLSPDPESSQSQTVEGVDETSEPENGPVPTTGKTCSSRPKLFSFSMVNSYGTA
NISPLAGNVLKLTPHSTIAIDWDSETKRQCYNDQEAEAYEKHESMMQAQKKKATVALREC
IELFTTMETLGEHDPWYCPTCKKHQQATKKFDLWSLPRILVVHLKRFSYNRCWRDKLDTV
VDFPIRDLNMSEFVCDPKAEPYIYDLVAVSNHYGGMGGGHYTAYAKNKADRKWYYFDDSS
VSSASEDQIVTKAAYVLFYQRRDGEGASRTTPSASLGGASDSPDDHMDTN
NT seq 3033 nt   +upstreamnt  +downstreamnt
atggcggagggaggtggacccgagccgggtaacgccgcggagcccgtcgcggaacccgtg
cctgctcaaaccccgcttccttcaatcgatagtcaaaagcagaccatcggagctcttctg
aaaactacactccgaaaaggagacgaatggtttttgattgacagtcgatggttcaaacag
tggaaaaaatatgtgggctttgatagctgggatttgtacaacgtcggagaacaaaatttg
tatcctggacccgtcgacaactctggccttttttcagaccaggagacccaagcgctgaag
gaacatctcatagatgagttagattatgtcctagtgcctacagaagcatggcgaaacctt
gtcagctggtacggatgtctagaaggacagcggcccatcgtcaggaaggtggtcgagcat
ggcatgtttgtgaagcattgtaaagtggaagtctatctgttggagctgaacctgtgcgag
aatgacaacatggacaacgtggtcactcgccatttcagtaaagctgacactattgatacc
attgagaaagagatgaggactctctttaatatcccatcagaaaaggagactcggttgtgg
aacaagtacatgagtaacacttacgagcagttaaacaagcctgacagcactgttcaggat
gccgggctttttcagggccaggtacttgtgattgagagtaagaatgaggatggcacgtgg
cccagacaagcctcccatcccaaatccagtacagccacctctaggactttcacaacgtca
ccgaagctatcctccaattcctctgccaccatttcttccacagtgaccaatggagacagc
agcagcagcagcaactcgagctacatgctgaacaacagcacctcgggtggaatcaggttg
ggagggtacagctcatacagctcatcctacagttacagagagcctgcttctcagcctggc
ctgtgcggcctcagcaatctgggcaacacctgcttcatgaactctgcactccagtgtctg
agcaattcgcctccactgactgaatattttctggaggacaaatatgaagccgagatcaac
cgagagaatcctttaggaatgcgtggggaaatcgctgaggcctttgcagacttgatcaaa
cagatgtggctcagccggagcagctatgtggctccacgtacttttaaaacgcaggttggc
cgttttgcccctcagttctcagggtaccagcagcaggactctcaggagcttctggccttc
ttgcttgatggcttacatgaagacctgaaccgtgtcaagaagaagccttacttggccttg
agagatgcagagggcaggccagatgagattgtggctaaagaggcatggacaaaccaccgg
ctacgtaacgattccatcattgtggatatcttccatggcctgttcaagtccacgctggtc
tgcccagagtgctccaaagtgtcagtcacttttgaccctttctgctacctcaccttgcca
ctgcccatgaagaaagatcgcaccatggaagtgttcctggtccgcaacgaccctcagtcc
agacccatgcaatttcgtttggtggtccctaaactaggtatagtggcagacctgtgcagc
tcgttagccaagctatctggagttcctgcagagaatatgattgtggctgatgtttacaat
cacagatttcataaaatttacagaaaggatgaaggtctcaaccacatcatggaaaaagat
gacatctttatctacgaggtttctgaggaggacagtgagcggatgaatctgccagtatac
ttcagggagagagatgtgaagcacagcggaggctcctcgtgcaccatgctgtttggtcaa
ccactcctcatcacggttcctcgccacaatctctcaccagacacactgtatgagcgtgta
cttgagagaattgggcgttatgtgaagcactcacagggtaccataatggagagcagagtg
ttcgctacagccacatcctctagtagccattcagaccgaggagatttagcgtctagccac
aatgcagggttaagtagctgtagcagcccaatgtccaatggggcatccagcagtgcttgt
tctaccactggcagcaaccactctgacacatgcaatgggcccaatggagtgtgtgatggt
gaagaggaagctatggaccaccaactgagcccggatccagaaagcagccagtcacagact
gtagaaggggtggacgagacctcggagcctgagaacggacccgttcctaccactggaaag
acttgttcttctcgacctaaacttttctcctttagcatggtgaactcctatggcacggct
aatatcagtcccttagctggcaacgtcctcaaactcacaccacattccacaatagccatt
gactgggactcagaaaccaaaagacagtgctacaacgaccaggaggcagaggcttacgag
aaacatgagagcatgatgcaagcgcagaaaaagaaggccacggtggctctgagggaatgc
atcgagctcttcactaccatggagactcttggagagcacgatccatggtactgccccacc
tgtaagaagcaccagcaggctacgaaaaagtttgatctgtggtcactaccccgcattctg
gtggttcatctgaaacgcttctcttacaaccgctgctggagagacaaactggatactgtc
gtcgatttccccatcagggatctgaacatgtctgaatttgtctgcgaccctaaagctgag
ccatatatatacgaccttgttgctgtctctaaccactatggaggaatgggtggaggccac
tatactgcatatgctaagaataaggctgacagaaaatggtattactttgatgatagcagt
gtgtcctctgcctctgaggatcagatagtgactaaggcagcctatgtgcttttctaccaa
cggcgagacggagagggtgcatccagaaccactccctctgcatcgctcggaggagcttca
gattctcccgatgaccacatggacaccaactga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (58)   
   KEGG ORTHOLOGY (1)   
   RefGene (53)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (74)   

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