KEGG   Ictalurus punctatus (channel catfish): 108273822
Entry
108273822         CDS       T04658                                 
Symbol
dhx32a
Name
(RefSeq) DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 32a isoform X1
  KO
K18994  pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:5.6.2.6]
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ipu03041]
    108273822 (dhx32a)
Enzymes [BR:ipu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     108273822 (dhx32a)
Spliceosome [BR:ipu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    108273822 (dhx32a)
SSDB
Motif
Pfam: OB_NTP_bind HA2_C HA2_N nSTAND3 AAA_22
Other DBs
NCBI-GeneID: 108273822
NCBI-ProteinID: XP_017338883
Ensembl: ENSIPUG00000005787
UniProt: A0A2D0S810
Position
13:23062551..23074988
AA seq 743 aa
MAQSSSGVSDGESAEMNETSSLKSLEEVDENFGFGDDLELNQFDGLPYSSRYYKLLKERH
QLPIWESRQKFMSALETNQLVIISGTTKTGKSSQVPQWCAEFCLSAQYQHGVVVCSQIQR
QQAVDLALHVADEMDVNIGHEVGYSIPLENCCSTDTILRYCTDDVLLRELMSDPLLEHYG
VVVIDQAHERTVSTDLLMALLREVLLQRTELRVVLLSVMPASHTLLTHFSGAAHLHVEAP
CSPEVLHSGRDSTESFFAALRLVLEVHRTKEPGDIAVFLASEQEIGCACSLLAKEASRLS
SNLGELVPVAVCPGHAGICPPITQHQKRGRRVFLSYSQSEDMFWSVDTVNFVIDTGVEKR
CVYNPRLRASSEVIRPISRCRAEIRKQLAGSAGKCFCLYPEETELCTEIPARILEANITS
AVLFLKRMEVAGIGRCDFISRPDPEGLMQALEELDYLAALDDDGNLSEIGIIMSEFPLDP
QMAKALLASCEFDCASEVLTIAAMLAAPSCFLEPPVGMETEAMLCQMKLYHPEGDHFTLI
NIYNAYKRSQRAPGFTQEKWCQDYFLCCAALQTADAIKAELTDLLRRLELPISEPAFGTK
TNTLNVKRALLAGFFMQIARDVDGSGNYFMLSNKHVAQLHRLSAYGAKVHKLGLPEWVLF
HEFTLSNSNSIRTVTQISPKVFIQTAPQYFFYNLPPSECKELLQHILDTELAGSTKSRQK
MHPVLKDTPKEQESQSYDRCVIQ
NT seq 2232 nt   +upstreamnt  +downstreamnt
atggcgcagagcagtagcggggtttccgacggagaaagtgctgaaatgaatgaaacgagt
tctctgaagagtttggaagaggttgatgagaatttcgggtttggagatgatctggagctg
aatcagtttgatggcctcccttactcttctcggtattacaagctcctgaaggagagacac
cagctccctatctgggaatcgagacagaagtttatgagtgctttagaaaccaatcagctc
gtcatcatctcgggtacaacaaaaactggcaaaagttcacaggttccacagtggtgtgca
gagttctgtctgtcagcgcagtaccagcatggtgtcgtggtgtgtagtcagatccagaga
cagcaggctgtcgatttggccctgcatgtagctgatgagatggatgtcaatatcggtcat
gaagtgggctacagcattccgctcgagaactgctgctccactgacactattctcaggtac
tgcaccgatgacgttctgctgagggagctcatgtccgacccattactggagcattacggt
gtggttgtgatcgatcaggcccatgagcgcaccgtgagcacagacctcctaatggctctg
cttcgagaggtgctcctgcagcgtacagagcttcgggtggtgctgctgtccgtcatgcca
gcctcgcacacactcctcacacacttcagcggtgcagctcacctgcatgtggaagcacca
tgctcgcctgaagttctccacagcggacgagacagtacagagagcttctttgcagctttg
agactcgtcctggaggtgcacaggactaaagagcccggggacattgctgtgtttctcgcc
tcagaacaggagataggctgtgcctgtagtcttctggctaaagaagcatccaggttaagc
agtaatcttggagagctggtgccagtggcagtgtgcccaggccacgctgggatctgtcca
ccaatcacgcagcaccaaaagagaggcaggagggtatttctgtcctacagtcaatcagaa
gacatgttttggtcagtggacacggtcaattttgtgattgacactggagttgagaagaga
tgtgtgtataacccacggttgagagccagctctgaggtaatcagacccatcagtagatgt
cgggcagagatccgtaaacagctggctggatcagcagggaagtgtttctgtctgtaccct
gaggagaccgagctctgtactgagattcctgctcggatcctagaagcaaacatcacctca
gctgtgctcttcctcaagaggatggaggtggctggaattggccgctgcgacttcatcagc
aggccagatcctgaaggcttaatgcaagctttagaagagttggattatcttgcagctttg
gatgatgacggaaacctttctgagatcgggatcataatgtccgagttccccttagaccct
cagatggctaaagctctgttagcgtcgtgcgagtttgattgtgccagtgaggtgctaact
attgcagccatgttagcagctccaagctgcttcctagagccccctgttggcatggaaaca
gaagcaatgctgtgccagatgaagttgtatcatccagagggagaccacttcaccctgatc
aatatctacaacgcttataaacgcagccagagagcaccaggtttcacacaggagaagtgg
tgtcaggattactttctgtgctgcgcagctctgcagactgcagacgccataaaggccgag
ctgactgacctactgaggagactggagctcccgatctctgagccggccttcggcaccaaa
accaacacgctcaatgtgaagcgagcactgctggctgggttcttcatgcagattgctcgt
gatgtggatggctctggaaactatttcatgctgagcaataagcacgtggcgcagcttcac
cgcctttcagcatacggggccaaagtgcacaaactcgggctgcctgagtgggtgctgttc
cacgagttcacactctccaacagcaacagcattcgtacagtcacacaaatctcccccaag
gtgttcatccaaacggcaccgcagtatttcttctacaacctgccccctagcgagtgtaag
gagctcctgcagcatattttggacaccgagctggctgggagtacaaagagcagacagaaa
atgcatcctgttcttaaagacacaccaaaagaacaggagtcgcagtcttatgacagatgt
gtgatacagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (28)   

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