KEGG   Ictalurus punctatus (channel catfish): 108273940
Entry
108273940         CDS       T04658                                 
Symbol
twnk
Name
(RefSeq) twinkle protein, mitochondrial
  KO
K17680  twinkle protein [EC:5.6.2.3]
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:ipu03029]
    108273940 (twnk)
Enzymes [BR:ipu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     108273940 (twnk)
Mitochondrial biogenesis [BR:ipu03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Mitochondrial DNA maintenance factors
    108273940 (twnk)
SSDB
Motif
Pfam: AAA_25 DnaB_C ATPase AAA_22 AAA_19 AAA_29 AAA_16 T2SSE nSTAND3 ABC_tran TsaE AAA_33 AAA_11 cobW Pal1
Other DBs
NCBI-GeneID: 108273940
NCBI-ProteinID: XP_017339130
Ensembl: ENSIPUG00000015571
UniProt: A0A2D0S9K9
Position
13:complement(15905524..15911435)
AA seq 736 aa
MWTRDFLRRSACLFLQGLPYGLHRQVLRYMNCIQVHSSLLQYPGWRSSWCHLYGESKPTA
IFSINPCRTLKRDAKSSIDVPVHPITVTDIKQYLRSKGISFHDGYSCLHASSIFVEPKSQ
VPEKAGKDSYTMFIDKMTGQFLCKETLVEGSWEDLQDCLEVMQKEGHTSISPDVLLSYSE
TVEEQGQREMELKEVHRIWSSAMMFSDLHEEELQLIKTMFQITKLNTTTLKRFEVRFFKP
TKSLVFPWFNGRDFSLRGIKLLSAATKDDGQVVYTEASIPKLSNYYNLFGLPLVGRKETE
MVLTGSEIDSMAVSQATGLPALALPRGVSCLPPVLLPYLEQFRKVTLWLGGDMRAWEASK
IFSKKLGLKRCSLVRPGEFQPCPNEALVQGRNLARIVKASIPAAHKSIVSFKQLRDDVFG
ELTNVEQVAGIKWARFPELNRILKGHRKGELTVFTGPTGSGKTTFISEYALDLCMQGVNT
LWGSFEIKNVRLAKIILTQFAMQRLEENLEQYDYWADKFEELPLYFMTFHGQQNVKTVLD
TMQHAVYLYDISHVIIDNLQFMMGQENLSVDKFAVQDSIIGTFRKFATNSSCHVSLIIHP
RKEEDDKELQTASIFGTAKASQEADNVLILQEKKLVTCPGRRSLQVAKNRFDGDVGIFPL
EFNKSSLTFSAPVKSKQKLRKVKGEKTENSETEVKEKNEKVSKSAKEPKTPKTLKDPSTR
KNEMNGEGRSNTKDDG
NT seq 2211 nt   +upstreamnt  +downstreamnt
atgtggacgagggatttcctgaggaggtcagcctgcctcttcttacaagggctgccttat
ggacttcatcgtcaggtcctaagatacatgaactgtattcaggtgcacagctctctgctg
cagtatcctggctggagatcttcttggtgtcacctctatggagaatccaaacctacagcg
atcttttctattaatccctgcagaacattaaaaagagatgcaaagtcttcgatagacgtt
cctgtccaccccatcacagtgacagacatcaagcagtatctgcgctccaagggaatttcc
tttcacgatggttatagctgcttacatgctagcagtatttttgtcgagccaaaatcacaa
gtcccggaaaaagctgggaaagacagctatacaatgttcattgacaaaatgacggggcag
tttctctgtaaagagactctagtagaaggaagctgggaagacctgcaggactgtctggag
gtgatgcagaaagagggacatacctcaatcagcccagatgttttgttgagctactccgag
actgtggaggaacaggggcagagggagatggaactgaaagaggtgcacaggatttggagc
agtgccatgatgttctcagatctacacgaagaggaattgcagctcatcaaaacaatgttc
cagatcactaagctcaacaccacaactctgaagaggtttgaggtgagattttttaagcca
actaaaagtcttgtgtttccctggtttaatggacgagactttagcctccgaggcataaaa
ctgctgtctgctgccaccaaagatgatggccaagtggtgtatacggaagctagtattccc
aaattatccaattactacaacctttttggccttccactagtaggacggaaggaaacggag
atggtactcacgggaagtgagattgacagtatggcggtgagtcaggccactggcctgcct
gctttggccttgccacggggggtcagttgtctgcccccggtacttcttccttacctagag
cagttcaggaaggtcacactgtggctgggtggggacatgcgtgcttgggaggcttcaaaa
atcttctcaaagaaactaggattgaagcgctgttctcttgtgcgcccgggggaatttcag
ccatgtcctaatgaggcgctggtgcaaggcaggaaccttgcgcgtattgtaaaggcctcc
atccctgctgcccacaaatctatagtgtcctttaagcagctcagggatgacgtgtttgga
gagctaaccaacgtagagcaggtggcaggaataaagtgggcccgctttcctgagctcaat
cgaatcctaaaaggccatcggaagggggagctaacagtattcacaggtcccactggcagt
gggaagaccaccttcatcagtgagtatgctcttgacctgtgtatgcagggagtgaacaca
ctgtggggcagctttgagatcaagaacgtacgtttggccaaaatcatcctgacccagttc
gctatgcagagactggaggaaaacttggagcagtacgactactgggctgacaagttcgag
gagcttccactctactttatgaccttccatggacaacagaatgttaagaccgtgcttgac
accatgcagcatgctgtttacctctatgacatcagtcacgtgatcatcgacaacctgcag
tttatgatggggcaggagaacctgtctgtggacaagtttgcagtacaggacagcattatt
ggaacttttagaaaatttgcaacaaacagtagctgtcatgtgagcctgatcatccatcct
agaaaagaagaagatgacaaagaacttcagacagcatccatttttggcacagctaaggcc
agtcaggaggccgacaatgtactgatccttcaggagaaaaagcttgttacctgtcccgga
cgcagatctctgcaggtggccaagaaccgcttcgatggggatgtggggattttccctctg
gagttcaacaagtcttcacttactttctcagccccagtgaagagcaagcaaaaactgcgc
aaggtcaaaggggagaagactgagaattcagagactgaagtcaaggagaaaaatgagaaa
gtctcaaagtctgcaaaagaacctaaaaccccaaagacactgaaggacccatcaaccaga
aagaatgaaatgaatggagaaggaagaagcaatactaaagatgatggttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (15)   
   Pfam (15)   
All databases (59)   

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