KEGG   Ictalurus punctatus (channel catfish): 108274161
Entry
108274161         CDS       T04658                                 
Name
(RefSeq) target of rapamycin complex subunit lst8
  KO
K08266  target of rapamycin complex subunit LST8
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04136  Autophagy - other
ipu04140  Autophagy - animal
ipu04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    108274161
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    108274161
   04136 Autophagy - other
    108274161
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ipu04131]
    108274161
Membrane trafficking [BR:ipu04131]
 Autophagy
  Other autophagy associated proteins
   mTORC1 complex
    108274161
   mTORC2 complex
    108274161
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 Hira TAF1C_beta-prop DUF5854
Other DBs
NCBI-GeneID: 108274161
NCBI-ProteinID: XP_017339603
Ensembl: ENSIPUG00000002358
UniProt: W5U9B8
Position
13:12401885..12405405
AA seq 326 aa
MNVNQGTVGSDPVILATAGYDHTVRFWQAHSGICTRTVQHQDSQVNSLEVTPDRSMIAAA
GYQHIRMYDLNSNNPNPVINYDGVSKNITSVGFHEDGRWMYTGGEDCMARIWDLRSRNLQ
CQRIFQVNAPINCVCLHPNQAELFVGDQSGVIHVWDLKTDHNEQLIPEPEVSVNSVHIDP
DASYMAAVNSSGNCYVWNLAGGIGDEVTQLIPKTKIPAHKRYSLRCKFSPDSTLLATCSA
DQTCKIWRTSNFSLMTELSIKSNNPGETSRGWMWDCAFSGDSQYIVTASSDNLARLWCVE
TGEIKREYSGHQKAVVCLAFNDSVLG
NT seq 981 nt   +upstreamnt  +downstreamnt
atgaatgtaaaccaaggcacagtcgggagtgacccagtgatcctggccaccgctgggtat
gaccacacagtccggttctggcaggcacacagtgggatctgcaccagaacagtacagcac
caggactctcaggtgaattcactagaagtaacacctgataggagcatgattgcagcagct
ggttatcagcacatacgcatgtatgacctcaactcaaacaatccaaatcctgtaatcaat
tacgatggcgttagcaaaaatatcacatctgtcggcttccatgaggatggcagatggatg
tacactggaggagaagactgtatggcacgcatctgggatctaaggtcaagaaatttacag
tgtcaaaggatattccaggtcaacgcacccattaattgtgtgtgccttcatcccaaccaa
gctgaattgtttgttggagatcaaagtggtgtgatccacgtctgggatcttaaaacagac
cataacgagcagctcatcccagagccagaggtgtctgtcaactctgtgcatattgacccc
gatgctagctacatggctgctgtcaacagctccggcaactgttacgtgtggaatttggct
ggaggaatcggtgatgaggtgacgcagcttattcccaaaaccaaaatccctgctcacaaa
cgttactctttgcgctgtaaatttagtcctgactccacattgctggctacctgctctgca
gaccagacatgtaagatctggaggacttcaaacttctcgttgatgaccgagctgagcatt
aagagcaacaaccctggagagacttctcgtggctggatgtgggactgtgccttctctgga
gactcgcagtacattgtcacagcctcttcggataatttggcacgtctgtggtgtgtggag
acaggggaaatcaagcgtgagtacagtgggcatcagaaggctgtggtgtgtctggccttc
aatgacagcgtgcttggttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (6)   
   Pfam (6)   
All databases (43)   

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