KEGG   Ictalurus punctatus (channel catfish): 108275190
Entry
108275190         CDS       T04658                                 
Symbol
clpxb
Name
(RefSeq) ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial
  KO
K03544  ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:ipu03110]
    108275190 (clpxb)
Chaperones and folding catalysts [BR:ipu03110]
 Heat shock proteins
  HSP100
   108275190 (clpxb)
SSDB
Motif
Pfam: AAA_2 AAA ClpB_D2-small AAA_5 Mg_chelatase Sigma54_activat AAA_22 AAA_7 AAA_14 IstB_IS21 AAA_16 Sigma54_activ_2 NACHT T2SSE RuvB_N nSTAND3 AAA_28 DEAD ABC_tran TsaE ResIII AAA_23 PduV-EutP AAA_18 AAA_33 AAA_24 PhoH Parvo_NS1
Other DBs
NCBI-GeneID: 108275190
NCBI-ProteinID: XP_017341314
Ensembl: ENSIPUG00000022495
UniProt: A0A2D0SF20
Position
14:14998377..15010501
AA seq 624 aa
MSCCTCGSAAIRLLSSAHKGLSRSHVKFYALSRTATREAHLPLAVQARSFSESGVCFASK
ENTPTDGSSDEGKKSATDTVGKRSKGSGGSGKGGSQLRCPRCGDTCTHVETFVPFTRFVK
CEKCHHFFVVLSESDPKRGLSKEAESAAEAIKLALAQKPPPPPKKIYAYLDKYVVGQSYA
KKVLSVAVYNHYKRIYNNLPASGGLQAGTEKPISFTPQQLEIRRREDEYRFTKLLQINPH
GNALGAAVQQQAAQQATPKKRGGEVLDSTHASIKLEKSNIVLLGPTGSGKTLLAQTLAQC
LDVPFAICDCTTLTQAGYVGEDIESVIAKLLQDANYSVEKAQQGIVFLDEVDKIGSVPGI
HQLRDVGGEGVQQGLLKLLEGTIVNVPEKNSRKLRGETVQVDTTNILFVASGAFTGLDRV
ISRRKNEKYLGFGSASNLGQGRRAAAAADLANSSGSELDVISEMEEKDQLLSQVEARDLI
EFGMIPEFVGRLPIIVPLHSLDEQALMRILTEPRNAVVPQYQALFSMDKCELNVTPDALR
AIARLALERKTGARGLRSIMEKLLLEPMFEVPQSDIVSVELNKDVILGKTEPRYIRASTN
ETTEEEYDYGIEENWLRQADVANN
NT seq 1875 nt   +upstreamnt  +downstreamnt
atgtcttgctgtacatgtggatctgctgcgattcgtctcttgagttcagcacacaaaggg
ttatcacgctcacacgttaagttctatgctctcagtagaacagcgactcgtgaagcccat
ctacctcttgcagtacaagccagatcgttctcagagagtggcgtgtgtttcgcctcaaag
gagaacacaccaacagacggctccagtgatgagggaaagaagagtgcgacagatacagtt
gggaagagatctaagggttctggtgggtcagggaaaggaggaagccagctacgttgcccc
agatgtggagacacatgcacacatgtggagacgtttgtgccattcacacgttttgtgaaa
tgtgaaaaatgtcatcacttctttgtggtgctttctgaaagtgaccctaagaggggtctg
agtaaggaagcggaatctgctgccgaagctattaaactggcactcgctcagaagcctccc
ccaccccctaaaaagatctacgcctacctcgataagtatgttgttggccagtcatatgcg
aagaaggtgctgtcagttgcagtctataaccactacaaacggatctacaacaaccttcca
gcatcaggcggactgcaagcggggacagagaagccgatctcgtttactccccagcagctt
gagatcagaagacgggaagatgaatacagatttacaaaacttcttcagatcaacccacat
ggcaatgctcttggtgcagctgttcaacaacaggctgctcaacaagctacgccgaagaaa
aggggtggcgaggtgctggactctacccatgctagcatcaaactggagaagagtaacatt
gtgctgctaggccctactggatcaggtaaaacacttttagcgcagactctggctcagtgt
ttggatgttccctttgccatctgtgattgtaccacactgacccaggcaggctacgtaggt
gaggacattgagtcagtcattgcaaagctgctgcaagatgccaactactcagtggagaaa
gcccagcaaggaatagtatttctggatgaggtggataagattggcagtgtcccaggtatt
caccagctcagagatgtaggaggagaaggtgtccagcagggtttgttgaaactcctggag
ggcaccattgtaaatgtaccagaaaagaacagcaggaagttacgaggtgaaaccgtgcag
gtggacacaaccaacatcctgtttgtggcatcaggagccttcaccggactggaccgggtc
attagccggaggaagaatgagaagtaccttggatttggctcggcctccaacctggggcag
ggacgccgtgcagcagcagcagctgatctggccaatagctcaggcagtgagttggatgtc
atttctgagatggaggagaaggatcagctcctgagtcaagtagaggcacgtgacctcatt
gagtttggcatgattcctgaatttgtaggtcgtctgcccatcatagtgcctttgcacagc
ctggacgagcaagcactaatgcgcattctcaccgagccccggaatgctgtggtgcctcag
tatcaggccctcttcagtatggataagtgtgagctgaatgtgactccagatgcactcagg
gccattgccagactggctcttgagcggaagactggagccagaggcctccgatccatcatg
gagaagctgctgttggagcccatgtttgaggtgccacagtcagatattgtgtctgtggag
ctgaataaggatgtgattttgggcaagactgaaccacgctatatcagagcttcaactaac
gagaccacagaggaggagtatgactatggcattgaagagaactggctgagacaagcagat
gtagccaacaactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (28)   
   Pfam (28)   
All databases (60)   

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