KEGG   Ictalurus punctatus (channel catfish): 108275439
Entry
108275439         CDS       T04658                                 
Name
(RefSeq) laminin subunit alpha-4
  KO
K06241  laminin, alpha 4
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04510  Focal adhesion
ipu04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    108275439
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    108275439
SSDB
Motif
Pfam: Laminin_G_2 Laminin_G_1 Laminin_II Laminin_G_3 Laminin_I Laminin_EGF DUF5089
Other DBs
NCBI-GeneID: 108275439
NCBI-ProteinID: XP_053541993
UniProt: A0A9F7RR50
Position
2:11..18009
AA seq 1622 aa
MGCRRCVCATAALHSSCNTLTQACQCRPGAGGRYCESCLPGYWDYTHTGCKKCDCPEGNC
DVHTGECLPEMSQVSECSIDCDECIWHLIGDVRQSNKTVDQLRNSILNISTGAAAYDRLK
YYNYTAHTLRVQFVGWRNKSVVMRKHTGELEEETPHLVTDTELLTHQEEVVMSVGMQVDS
DTLHSFTLAEMLAVNLTSLNVLIEDMISDWEVYSVQQEMDPEEQKQKESEAEHMLSHMRT
QNLSPKHTLATQENAHTHQLLQHVREMEKSVLLMEGRLPAVRELMKRFSSSLTHGQNHLN
KAHDTLQQTHNTHTLNLLHLQRREAHKHRLMENYNGVNQTVMSANGILVEASVGVADLGI
MVTNVTEYHAEVDGAAASIQERTDQLSKADHNLVQRATEHAHELQRHAHELQHNLKGSDT
HGFVQKALEASNVYDNIVKYIDEADVISMSTLNMSNRTEDALDGLQSQLNFLKTQSGHTF
KESVTRNSEYKEVEVNVADAKKYIEETREMLQTSRDTLEELVTSMNTLQRVRKLQSTQEA
AERALNHSAEVLGVITPIREQVDEWSKNMKDNQYSTSAYEQAVDSALNTVEGLSIIVPQL
LTKLRDVEEKKPVNVSTNIMRVRELIAQARSVASKVQVSMKFNGQSSVELHPPADVAELK
AVTSISLYVRVDPDSDPIEDRFLLYLGDKNGNKDYMGMAIKNDNLVFVYKLGGDDVEIPL
SSKPVSSWPPVFNHVRVERLGRHGKVYLTVPSQDTAAEQKFIQKGEWDGTESLFQLDPRD
TVFIIGGAPMDVKLPPALSLAPFVGCVELSSLNNEVISLYNFKKLNDMNLAVSKPCPRYK
LAFSQGRVASYLFDGSGYALVRNIERRGRISVFTRFDIEVRTVTHNGILLLMANEGNFFV
LEMRNGFLRLVYDFGFVNGPIVLEGNLTKLQINDARYHEVSVIYHQSKKVILLVDRSFIK
STENEKKTLPFNDIYIGGAPSDMLQSRPEFSSLIGLKGCVKGFQFQKKDFNLLEEPGTIG
ISSGCPEESFMSHKAYFTGDGYLSSTAKISPFSSFEGGMSFRTTQPSGLLFYHRDGTDEF
SLSLENGAVVLHSRGTKVKSKKHYSDGRPHFLVASVTKQKYQLVVDDRDKQEKKNPGSAL
QGDGVKEFYYGGSAQSNINNFTGCISYAYISRQDRDIEAEDFQRYSENVGVSLQDCPVEK
TPPAVRHTRSARHTPYNTHSLPHTPAALHQMSIDQPVLPQSILGVQDDPLFAPEVEATSC
YLSSRPRAIRNAHYFSSNSRQSYDGIAEVIRERLKFSVSVRTRSWRGMIVAMHGASDEDF
IALFLHDGKLVFMFSSARDVLRLSSTDTYNDGSWHNVVFIRKGNRGLLVVDGVLVMEDKT
QSDDFTLNLQNPLYVGSLPGGYTNKNMEVTAGFSGCLRDLRLNDHFLLSVPISYRVTPCL
EGKTEEGMFFFKEGGHAQLYTPINVGERLEVVMEFRPRVATALLLHLYIKPEVNLSLYLQ
NGQVFVQVNKETCTVNVPAENGVCDGNWHRVKVVRQGSELIVDVDGEQKRVNSTSVPLKK
DRVLMPLYIGGAPKNTIEPVSVTMKSSYVGCVRNVSINQLSIKNKHTLFTEGVITVDGCP
VA
NT seq 4869 nt   +upstreamnt  +downstreamnt
atgggctgtaggaggtgtgtgtgtgcaactgcagctctgcactcgtcctgtaacacactc
actcaggcgtgtcagtgccgcccgggggccggaggacgctactgcgagagctgcttacca
ggctactgggactacacacacactggctgcaagaagtgcgactgtcccgaggggaactgt
gacgtccacactggagagtgtctacctgagatgtctcaggtcagcgagtgcagcattgac
tgtgatgagtgtatctggcacctgattggtgatgtacgtcagtccaataaaacagtggat
cagttgaggaacagcatcctgaacatctctactggagctgcagcatacgatcgcctcaaa
tactacaactacactgcacacactctcagggtgcagtttgtaggatggaggaataaatca
gtggtgatgaggaaacacacgggagagctggaggaggaaacaccacaccttgtgactgac
acagagctgctcacacaccaggaggaggttgtgatgtcagtagggatgcaggtggatagt
gacacactccacagcttcacattagccgagatgctagcggttaatctgacgtcccttaat
gtgttaatagaagacatgatcagtgattgggaggtgtacagtgtgcagcaggaaatggat
cctgaggagcagaagcagaaggagagtgaagctgaacacatgctgagtcacatgagaacc
cagaatctgtcacccaaacacacactcgctacacaggagaatgcacacacacaccagctt
ctccagcatgtgcgtgagatggagaagagtgtgttgctgatggagggacgacttcctgca
gtcagagagttgatgaagcgctttagctcgagtctcacacatggccagaatcacctcaac
aaagcacatgacacactgcagcaaacacacaacacacacacactcaacctgctccaccta
caacgcagagaggctcacaagcatcgtctaatggagaattataacggtgtcaatcagact
gtcatgtcagccaatggcatcttagttgaggcgtctgtgggcgtggcagatttgggtatc
atggttacgaatgtgacggaataccatgcggaggttgacggcgctgcagcgtcgatacag
gagagaaccgatcagctctctaaagcagatcacaatttagtgcagagagctactgagcat
gctcacgagctgcagagacacgcccacgaactgcagcataatctgaagggcagtgataca
catggatttgttcagaaagctctggaagcgtcgaacgtctacgacaacatcgttaaatac
atcgatgaagctgacgtgatcagcatgagcacgctgaacatgtccaacaggacagaggat
gcccttgacggtttacagtcccagctgaacttcctcaaaacacagagcggtcacacgttt
aaagagtctgtcacacgcaactccgaatacaaggaggtggaggtgaacgtcgctgacgcc
aaaaaatacatcgaggagaccagagaaatgctgcagacgtcacgggacacactggaggag
ctcgtcaccagtatgaacacactccagagagtccggaagctgcagtccactcaggaggca
gcagagcgcgctctcaatcactccgctgaagttctgggggtcattaccccaattagggaa
caagtggatgaatggagcaaaaacatgaaggacaatcagtactccacctccgcctatgaa
caggccgtggactccgcccttaacacagtggaaggtctgtcgataatcgtacctcagttg
ttgacaaagctgcgtgatgtggaagaaaagaaaccagtcaacgtgtccaccaacatcatg
agggtcagagaactcatcgctcaggctcgcagcgtcgccagcaaggtgcaggtatcaatg
aagtttaatggtcagtcctcagtggagctccacccacctgctgatgtagccgagttgaag
gctgtgacctctattagcctgtatgtgcgtgtggaccctgactcagaccccatcgaggac
cgcttcctgctttacctcggagacaagaatggcaataaggactacatgggcatggctata
aagaatgataacctggtgtttgtgtataaattgggtggagacgatgtagaaattccactc
agctccaaacctgtgagctcctggcctcctgtgttcaaccatgtgagagtggagagactg
ggtcgtcatggtaaggtgtatttaacagtccccagtcaggacacagcggctgagcagaag
tttatacagaaaggggaatgggacggaactgaatctctgttccagctggaccccagagac
accgtgttcatcatcggaggagctccaatggatgtcaagctcccacctgctctgagttta
gctccatttgttggctgtgttgaactctcctctctcaataatgaagtcatcagtctgtac
aacttcaaaaaactgaatgacatgaaccttgctgtgtccaaaccctgtcccaggtataag
ttagcgttctctcagggccgtgtagcgagttacctgtttgatggatctggttatgcgtta
gtgcggaacattgaaaggcggggcaggatcagtgttttcacacggtttgacattgaagtg
cgcacagtcactcacaacggaattctcctcctcatggctaacgagggtaatttcttcgta
ctggagatgaggaacgggtttctgcgattggtttatgatttcggatttgttaacggtccc
atcgtgttggaggggaacctgaccaaactgcagatcaacgacgccagataccatgaggtg
tcggtgatctaccaccagtctaagaaggtcattctcctggtagaccggagtttcattaaa
tccacagagaacgagaagaaaactctgccctttaacgatatttacatcgggggagctccg
tcagatatgttacagtcacggccggagttctcctctctgatcggactgaaaggatgtgta
aaaggatttcagttccagaagaaagactttaacctgctggaggaaccggggaccatcggc
atcagcagcggctgtccagaggagtcctttatgtcacataaagcatacttcacaggtgat
ggttatttgagttccacagcgaaaatctctccgttcagctcgtttgaaggaggaatgagc
ttcagaacaacgcaaccatctggattactgttctaccacagagacgggacggatgagttc
tctctctctctggagaacggtgcagtagttcttcactccagaggaactaaagttaaatcc
aagaagcactacagtgatgggcgacctcacttcctggtcgcttctgtcacgaagcagaag
taccagctggtggtagatgaccgagacaagcaggagaagaagaacccgggttctgcactt
caaggagacggagttaaggagttctactacggaggatctgctcagagcaacatcaacaac
ttcactggctgtatcagttatgcttacatcagcaggcaggaccgtgatatcgaggcggag
gatttccagcgttacagtgagaatgtgggtgtgtccctgcaggactgtcctgtggagaag
acgccccctgctgtacgacacacacgctctgcacgacacactccttataacactcactcc
cttccacacactcctgcagccttacaccagatgagcatcgaccaacctgtcctgcctcaa
agcattctgggagtgcaggatgaccctttgtttgctccagaggtggaggccacatcttgt
tacctctcatcccgcccacgtgctatcaggaacgcccattattttagtagcaacagtcgg
caaagttatgatggcattgctgaggtcattagagaaaggttaaagttctctgtgtcagtg
aggacacgctcgtggcgggggatgattgtggctatgcatggtgcgagtgatgaagacttt
attgcactcttccttcatgacggtaaactcgtcttcatgttttcctccgcacgagacgtc
ctgcggctcagcagcacagacacatacaacgatggaagctggcataacgtggtgtttatc
agaaagggtaacagagggctgttggttgtggacggtgtgttagtgatggaggataaaact
cagagtgacgacttcaccctgaacctgcagaatccactgtatgtgggcagccttccaggt
ggatacaccaacaagaacatggaggtgacagccgggttctcagggtgtctgagagatctg
cgtctgaatgaccacttcctcttgtctgtccccatcagttaccgggtgacgccgtgttta
gagggaaagactgaagagggaatgtttttctttaaggagggaggacatgcacagctgtac
acgcccatcaatgtgggtgagcggttggaagtggtgatggagttccgcccccgtgtggcc
acagcattgttactgcacttatacatcaaacctgaggtgaacctcagcctctacctgcag
aatggccaggtgtttgtgcaggtgaataaagaaacgtgcacggtgaatgttcctgccgaa
aatggcgtatgtgatggcaactggcacagggtcaaagtggtgaggcagggcagtgaactg
attgtggatgtggacggggaacagaagcgtgtaaacagtacgagcgttccgctgaagaag
gacagagtgttaatgccactttacattgggggagcaccaaaaaacaccatagagcctgtt
agtgtgacgatgaagagcagctacgtaggctgtgtgaggaacgtgtccatcaaccagctc
agcattaagaacaaacacacactgttcactgaaggagtcattactgtggacggctgtcct
gtggcctga

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (97)   
   KEGG ORTHOLOGY (1)   
   RefGene (93)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (115)   

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